Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Gm25239-201ENSMUST00000174915 86 ntBASIC35.07■■■■□ 3.2
1700012B07RikQ3V0S8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
1700012B07RikQ3V0S8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
1700012B07RikQ3V0S8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
1700012B07RikQ3V0S8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
1700012B07RikQ3V0S8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.98■■■□□ 2.55
1700012B07RikQ3V0S8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
1700012B07RikQ3V0S8 Gm15045-201ENSMUST00000117359 883 ntBASIC30.37■■■□□ 2.45
1700012B07RikQ3V0S8 Gm24109-201ENSMUST00000175489 103 ntBASIC30.25■■■□□ 2.43
1700012B07RikQ3V0S8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
1700012B07RikQ3V0S8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
1700012B07RikQ3V0S8 Psd-208ENSMUST00000224556 2034 ntBASIC29.59■■■□□ 2.33
1700012B07RikQ3V0S8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
1700012B07RikQ3V0S8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.44■■■□□ 2.3
1700012B07RikQ3V0S8 Gm23366-201ENSMUST00000175022 89 ntBASIC29.34■■■□□ 2.29
1700012B07RikQ3V0S8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
1700012B07RikQ3V0S8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
1700012B07RikQ3V0S8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
1700012B07RikQ3V0S8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
1700012B07RikQ3V0S8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
1700012B07RikQ3V0S8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
1700012B07RikQ3V0S8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
1700012B07RikQ3V0S8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
1700012B07RikQ3V0S8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
1700012B07RikQ3V0S8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
1700012B07RikQ3V0S8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.72■■■□□ 2.19
1700012B07RikQ3V0S8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
1700012B07RikQ3V0S8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
1700012B07RikQ3V0S8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
1700012B07RikQ3V0S8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
1700012B07RikQ3V0S8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.44■■■□□ 2.14
1700012B07RikQ3V0S8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
1700012B07RikQ3V0S8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.34■■■□□ 2.13
1700012B07RikQ3V0S8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
1700012B07RikQ3V0S8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.97■■■□□ 2.07
1700012B07RikQ3V0S8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
1700012B07RikQ3V0S8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
1700012B07RikQ3V0S8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
1700012B07RikQ3V0S8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
1700012B07RikQ3V0S8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.82■■■□□ 2.04
1700012B07RikQ3V0S8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
1700012B07RikQ3V0S8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
1700012B07RikQ3V0S8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.7■■■□□ 2.02
1700012B07RikQ3V0S8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
1700012B07RikQ3V0S8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
1700012B07RikQ3V0S8 Gm25238-201ENSMUST00000174914 89 ntBASIC27.59■■■□□ 2.01
1700012B07RikQ3V0S8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.57■■■□□ 2
1700012B07RikQ3V0S8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
1700012B07RikQ3V0S8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.5■■□□□ 1.99
1700012B07RikQ3V0S8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
1700012B07RikQ3V0S8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
1700012B07RikQ3V0S8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
1700012B07RikQ3V0S8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
1700012B07RikQ3V0S8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
1700012B07RikQ3V0S8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.36■■□□□ 1.97
1700012B07RikQ3V0S8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
1700012B07RikQ3V0S8 Gm27325-201ENSMUST00000175467 74 ntBASIC27.22■■□□□ 1.95
1700012B07RikQ3V0S8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
1700012B07RikQ3V0S8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
1700012B07RikQ3V0S8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.13■■□□□ 1.93
1700012B07RikQ3V0S8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
1700012B07RikQ3V0S8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.07■■□□□ 1.92
1700012B07RikQ3V0S8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
1700012B07RikQ3V0S8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
1700012B07RikQ3V0S8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
1700012B07RikQ3V0S8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
1700012B07RikQ3V0S8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
1700012B07RikQ3V0S8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
1700012B07RikQ3V0S8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.92■■□□□ 1.9
1700012B07RikQ3V0S8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
1700012B07RikQ3V0S8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
1700012B07RikQ3V0S8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.84■■□□□ 1.89
1700012B07RikQ3V0S8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
1700012B07RikQ3V0S8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
1700012B07RikQ3V0S8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.79■■□□□ 1.88
1700012B07RikQ3V0S8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
1700012B07RikQ3V0S8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
1700012B07RikQ3V0S8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.76■■□□□ 1.87
1700012B07RikQ3V0S8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
1700012B07RikQ3V0S8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
1700012B07RikQ3V0S8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.57■■□□□ 1.84
1700012B07RikQ3V0S8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
1700012B07RikQ3V0S8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
1700012B07RikQ3V0S8 Rab21-202ENSMUST00000218831 843 ntBASIC26.5■■□□□ 1.83
1700012B07RikQ3V0S8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
1700012B07RikQ3V0S8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
1700012B07RikQ3V0S8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.36■■□□□ 1.81
1700012B07RikQ3V0S8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
1700012B07RikQ3V0S8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
1700012B07RikQ3V0S8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.31■■□□□ 1.8
1700012B07RikQ3V0S8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
1700012B07RikQ3V0S8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.28■■□□□ 1.8
1700012B07RikQ3V0S8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
1700012B07RikQ3V0S8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
1700012B07RikQ3V0S8 Gm25262-201ENSMUST00000174934 133 ntBASIC26.23■■□□□ 1.79
1700012B07RikQ3V0S8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
1700012B07RikQ3V0S8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
1700012B07RikQ3V0S8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
1700012B07RikQ3V0S8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
1700012B07RikQ3V0S8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 697 ms