RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 TFF3Q07654 80 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 ALKBH1Q13686 389 aaKnown RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 BLMHQ13867 455 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 RAB39AQ14964 217 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 CDK5R1Q15078 307 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 TAB1Q15750 504 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 NEDD8Q15843 81 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 ARMCX4Q5H9R4 360 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF704Q6ZNC4 412 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 MS4A15Q8N5U1 240 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 SLC30A7Q8NEW0 376 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 OR2G2Q8NGZ5 317 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 RPS4Y2Q8TD47 263 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 THRSPQ92748 146 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 SMIM19Q96E16 107 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF799Q96GE5 643 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 DACH2Q96NX9 599 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 MED18Q9BUE0 208 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 COMMD4Q9H0A8 199 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 RGCCQ9H4X1 137 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 TBCCD1Q9NVR7 557 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 EIF3KQ9UBQ5 218 aaKnown RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 NUFIP1Q9UHK0 495 aaKnown RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 KLF2Q9Y5W3 355 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-217ENST00000616545 ZFYVE26Q68DK2 2539 aa10.13□□□□□ -0.79
TARDBP-217ENST00000616545 TRBV2A0A0J9YWF9 115 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 NKX2-6A6NCS4 301 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF503-AS2A6NEH8 195 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 F5H5K5 113 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 PSMD9O00233 223 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 CCRL2O00421 344 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 INMTO95050 263 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 RPP14O95059 124 aaKnown RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 AGFG2O95081 481 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ISG15P05161 165 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ACSM4P0C7M7 580 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 UBCP0CG48 685 aaKnown RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF12P17014 697 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 CFL1P23528 166 aaKnown RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 APEX1P27695 318 aaKnown RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 CX3CR1P49238 355 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 TUBA1BP68363 451 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 GALK2Q01415 458 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 RSPO1Q2MKA7 263 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 TIMM50Q3ZCQ8 353 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 DMKNQ6E0U4 476 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 SEZ6L2Q6UXD5 910 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 TMEM108Q6UXF1 575 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 COLCA1Q6ZS62 124 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 TUBA1AQ71U36 451 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 SPATC1Q76KD6 591 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 CATSPERDQ86XM0 798 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF584Q8IVC4 421 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ELMOD2Q8IZ81 293 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 OR5L1Q8NGL2 311 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 APOBEC3DQ96AK3 386 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-217ENST00000616545 C4orf45Q96LM5 186 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 OPALINQ96PE5 141 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 KCNS3Q9BQ31 491 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 C1QTNF5Q9BXJ0 243 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 TTTY10Q9BZA0 68 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 OR10A2Q9H208 303 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 OPA3Q9H6K4 179 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 CDH20Q9HBT6 801 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 NOX3Q9HBY0 568 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 FAM206AQ9NX38 181 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 ST6GALNAC2Q9UJ37 374 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 SPEF1Q9Y4P9 236 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 HIVEP3Q5T1R4 2406 aa10.12□□□□□ -0.79
TARDBP-217ENST00000616545 PCNX1Q96RV3 2341 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 LOC100509620A0A075B734 347 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 A0A0U1RQV5 110 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 C5orf49A4QMS7 147 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 TUBAL3A6NHL2 446 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 J3QKU1 62 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 MAGEB4O15481 346 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-217ENST00000616545 XRCC2O43543 280 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 GOSR1O95249 250 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 SERPINA3P01011 423 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 CRYAAP02489 173 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 CECR9P0C854 216 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 CELP19835 753 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 RAD52P43351 418 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 SLC6A9P48067 706 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 IDH3GP51553 393 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-217ENST00000616545 PRKXP51817 358 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 GP2P55259 537 aaKnown RBP10.11□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF121P58317 390 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-217ENST00000616545 BCL2L15Q5TBC7 163 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 TMEM244Q5VVB8 128 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 GDPGP1Q6ZNW5 385 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 PRSS45Q7RTY3 260 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 GPR141Q7Z602 305 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 PHC2Q8IXK0 858 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 OR13F1Q8NGS4 319 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 OR5AK2Q8NH90 309 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 PHYHIPQ92561 330 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 RADILQ96JH8 1075 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 WFIKKN1Q96NZ8 548 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms