RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SLC7A13Q8TCU3 470 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 C1orf147Q96MC9 270 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 ZNF48Q96MX3 618 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 NUAK2Q9H093 628 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 EFCAB1Q9HAE3 211 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 NOX4Q9NPH5 578 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 AURKCQ9UQB9 309 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 RER1O15258 196 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 MALLQ13021 153 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 C11orf91Q3C1V1 193 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 ZNF404Q494X3 552 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 CD276Q5ZPR3 534 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 TREML4Q6UXN2 200 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 COLCA1Q6ZS62 124 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 OR11L1Q8NGX0 322 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 Q8TCH9 128 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 RCN3Q96D15 328 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 HSH2DQ96JZ2 352 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 TMEM246Q9BRR3 403 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 RERGLQ9H628 205 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 PTTG3PQ9NZH4 202 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 KIF17Q9P2E2 1029 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 CLN8Q9UBY8 286 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 IER3IP1Q9Y5U9 82 aa14.91□□□□□ -0.02
SHKBP1-227ENST00000602011 PHYHO14832 338 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 SERPINA1P01009 418 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 ZNF26P17031 533 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 PITPNBP48739 271 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 SMIM11AP58511 58 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 COX10Q12887 443 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 HLXQ14774 488 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 HACD2Q6Y1H2 254 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 DCDC5Q6ZRR9 648 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 OR5AS1Q8N127 324 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 PLPP7Q8NBV4 271 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC7A6Q92536 515 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 DACT3Q96B18 629 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 FAM46AQ96IP4 442 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 TRIM36Q9NQ86 728 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 FGFR1OP2Q9NVK5 253 aa14.9□□□□□ -0.02
SHKBP1-227ENST00000602011 ARPC3O15145 178 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 NDUFA2O43678 99 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 CCDC22O60826 627 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 GMNNO75496 209 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 IGHV4-38-2P0DP08 117 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 FUT4P22083 530 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 FPR3P25089 353 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 OMPP47874 163 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 SLC7A2P52569 658 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 RPL15P61313 204 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 KRT72Q14CN4 511 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 SMARCD3Q6STE5 483 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 TMEM86BQ8N661 226 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 POU5F2Q8N7G0 328 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 OR10AD1Q8NGE0 317 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 ZNF420Q8TAQ5 688 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 ZDHHC16Q969W1 377 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 FAM162AQ96A26 154 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 TMIGD2Q96BF3 282 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 RSRC1Q96IZ7 334 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 FAM71F1Q96KD3 344 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 NUDT16L1Q9BRJ7 211 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 CDADC1Q9BWV3 514 aa14.89□□□□□ -0.03
SHKBP1-227ENST00000602011 UNC119BA6NIH7 251 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 SOCS2O14508 198 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 ENSAO43768 121 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 IDH3BO43837 385 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 CYB5R3P00387 301 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 RENP00797 406 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 CRYBA1P05813 215 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 DBHP09172 617 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 MDH1P40925 334 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 CD200P41217 278 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 CDKN2AP42771 156 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 CENPAP49450 140 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 ERFP50548 548 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 GPR157Q5UAW9 335 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 MOGAT3Q86VF5 341 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 OR2AJ1Q8NGZ0 328 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 OR4F5Q8NH21 305 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 BEX1Q9HBH7 125 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 KCNG2Q9UJ96 466 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 B9D1Q9UPM9 204 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 SAMD4AQ9UPU9 718 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 LHFPL6Q9Y693 200 aa14.88□□□□□ -0.03
SHKBP1-227ENST00000602011 PRKDCP78527 4128 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 SRRM5B3KS81 715 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 DYNC1I1O14576 645 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 MLNRO43193 412 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 COX4I1P13073 169 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 PSMB10P40306 273 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 GSK3BP49841 420 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 RAD23AP54725 363 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 MZT1Q08AG7 82 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 RFX4Q33E94 735 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 KRTAP27-1Q3LI81 207 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 FGD3Q5JSP0 725 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 WDR25Q64LD2 544 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 C8orf82Q6P1X6 216 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms