RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ZNF85Q03923 595 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 KLHL36Q8N4N3 616 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF799Q96GE5 643 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 ISYNA1Q9NPH2 558 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 CENPMQ9NSP4 180 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 NPAP1Q9NZP6 1156 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 COPS3Q9UNS2 423 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 RNF115Q9Y4L5 304 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 SNX5Q9Y5X3 404 aa10.64□□□□□ -0.71
TGFB1-204ENST00000600196 USP9YO00507 2555 aaPredicted RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 A0A1W2PR80 420 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 PTGES3LE9PB15 166 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 XRCC2O43543 280 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 ABHD16AO95870 558 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 LOXP28300 417 aaPredicted RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 TUBA1BP68363 451 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 TUBA4AP68366 448 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 NKX6-1P78426 367 aaPredicted RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 GPR50Q13585 617 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 IRF3Q14653 427 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 AHSA2Q719I0 299 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 TUBA1AQ71U36 451 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 PRSS45Q7RTY3 260 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 NANOGP1Q8N7R0 232 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 FCGR1BQ92637 280 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 PLPPR2Q96GM1 343 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 ALG8Q9BVK2 526 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 MND1Q9BWT6 205 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 SLCO1C1Q9NYB5 712 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 MRM2Q9UI43 246 aaKnown RBP10.63□□□□□ -0.71
TGFB1-204ENST00000600196 EDARQ9UNE0 448 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 LRP12Q9Y561 859 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 R4GMQ9 66 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 ADGRG4Q8IZF6 3080 aa10.63□□□□□ -0.71
TGFB1-204ENST00000600196 A0A0U1RQV5 110 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 TMEM269A0A1B0GVZ9 245 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 LOC390937A0A1W2PQ73 354 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 ABCD4O14678 606 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 PSKH1P11801 424 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 SELEP16581 610 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 CD53P19397 219 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 LIPAP38571 399 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 DDOSTP39656 456 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 RPS27P42677 84 aaKnown RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 GBX2P52951 348 aaPredicted RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 HCCSP53701 268 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 SELENOVP59797 346 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 TLE4Q04727 773 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 MALLQ13021 153 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 TBCEQ15813 527 aaPredicted RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 LIPNQ5VXI9 398 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 RPL22L1Q6P5R6 122 aaKnown RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 FBXW12Q6X9E4 464 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 Q6ZSR3 168 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF283Q8N7M2 679 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 YIPF7Q8N8F6 280 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF485Q8NCK3 441 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 HTRA1Q92743 480 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 SPSB4Q96A44 273 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 ZC3HAV1LQ96H79 300 aaKnown RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 AMELYQ99218 206 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 DOK1Q99704 481 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 OR10A2Q9H208 303 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF696Q9H7X3 374 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 CGGBP1Q9UFW8 167 aaPredicted RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
TGFB1-204ENST00000600196 GPR160Q9UJ42 338 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 IKZF2Q9UKS7 526 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 KLHDC2Q9Y2U9 406 aa10.62□□□□□ -0.71
TGFB1-204ENST00000600196 DHRS7CA6NNS2 312 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 F5H5K5 113 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 MYL12BO14950 172 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 SRSF10O75494 262 aaKnown RBP10.61□□□□□ -0.71
TGFB1-204ENST00000600196 CTAG2O75638 210 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ISG15P05161 165 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 RAC2P15153 192 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF250P15622 560 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF12P17014 697 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 EEF1B2P24534 225 aaKnown RBP10.61□□□□□ -0.71
TGFB1-204ENST00000600196 C21orf33P30042 268 aaPredicted RBP10.61□□□□□ -0.71
TGFB1-204ENST00000600196 CX3CR1P49238 355 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 WNT4P56705 351 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 MBNL2Q5VZF2 373 aaKnown RBP10.61□□□□□ -0.71
TGFB1-204ENST00000600196 TMEM154Q6P9G4 183 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF773Q6PK81 442 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 SLC22A25Q6T423 547 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 LRRN1Q6UXK5 716 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
TGFB1-204ENST00000600196 LHFPL3Q86UP9 236 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 AKAP1Q92667 903 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms