RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CYB5R1Q9UHQ9 305 aa15.22■□□□□ 0.03
SRSF1-208ENST00000584773 ATPIF1Q9UII2 106 aa15.22■□□□□ 0.03
SRSF1-208ENST00000584773 SAMHD1Q9Y3Z3 626 aaKnown RBP15.22■□□□□ 0.03
SRSF1-208ENST00000584773 GYPBP06028 91 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 RAC2P15153 192 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 FAHD2BQ6P2I3 314 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-208ENST00000584773 FBXW12Q6X9E4 464 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 PROKR2Q8NFJ6 384 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 APOBEC3DQ96AK3 386 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-208ENST00000584773 FAHD2AQ96GK7 314 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 OR2V2Q96R30 315 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 THTPAQ9BU02 230 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 CDADC1Q9BWV3 514 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 MUC13Q9H3R2 512 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 METTL17Q9H7H0 456 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-208ENST00000584773 REEP1Q9H902 201 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 TMEM106BQ9NUM4 274 aa15.21■□□□□ 0.03
SRSF1-208ENST00000584773 PRPF19Q9UMS4 504 aaKnown RBP15.21■□□□□ 0.03
SRSF1-208ENST00000584773 C5orf63A6NC05 138 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 ACOT8O14734 319 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 IGHV2-70P01814 119 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 CLUP10909 449 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 THBS2P35442 1172 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 RGS6P49758 472 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 CRMP1Q14194 572 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 MICAQ29983 383 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 SLC36A3Q495N2 470 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 FAM98BQ52LJ0 330 aaKnown RBP15.2■□□□□ 0.02
SRSF1-208ENST00000584773 ADGRG5Q8IZF4 528 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 ATG16L2Q8NAA4 619 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 OR2AJ1Q8NGZ0 328 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 ASB9Q96DX5 294 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 COG8Q96MW5 612 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 ATF6BQ99941 703 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 NIPSNAP1Q9BPW8 284 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 NPTNQ9Y639 398 aa15.2■□□□□ 0.02
SRSF1-208ENST00000584773 LOC105371242A0A075B767 164 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TRAV20A0A0B4J274 112 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 MLNRO43193 412 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 RGS9O75916 674 aaPredicted RBP15.19■□□□□ 0.02
SRSF1-208ENST00000584773 SBK2P0C263 348 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 SELEP16581 610 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TUBG1P23258 451 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TNFSF4P23510 183 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 LCN2P80188 198 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TRAP1Q12931 704 aaKnown RBP15.19■□□□□ 0.02
SRSF1-208ENST00000584773 RPL13AP3Q6NVV1 102 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 COLCA1Q6ZS62 124 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TMEM179BQ7Z7N9 219 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 LINC00471Q8N535 108 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 IQCF1Q8N6M8 205 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF283Q8N7M2 679 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF420Q8TAQ5 688 aaPredicted RBP15.19■□□□□ 0.02
SRSF1-208ENST00000584773 SIGLEC11Q96RL6 698 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 C19orf24Q9BVV8 132 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 C1QTNF5Q9BXJ0 243 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TMPRSS13Q9BYE2 586 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 TUBG2Q9NRH3 451 aa15.19■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF205O95201 554 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 PNPP00491 289 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF823P16415 610 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 PCMT1P22061 227 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 ZFP36P26651 326 aaKnown RBP15.18■□□□□ 0.02
SRSF1-208ENST00000584773 MMP16P51512 607 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 SEC61A1P61619 476 aaKnown RBP15.18■□□□□ 0.02
SRSF1-208ENST00000584773 SLC3A1Q07837 685 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 LNX2Q8N448 690 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF511Q8NB15 262 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 OR8G5Q8NG78 346 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 OR5L1Q8NGL2 311 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 LRGUKQ96M69 825 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 REPIN1Q9BWE0 567 aaKnown RBP15.18■□□□□ 0.02
SRSF1-208ENST00000584773 RBM4Q9BWF3 364 aaKnown RBP15.18■□□□□ 0.02
SRSF1-208ENST00000584773 CHID1Q9BWS9 393 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 DGCR6LQ9BY27 220 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 MED20Q9H944 212 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 IL19Q9UHD0 177 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 PPP1R3CQ9UQK1 317 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 COMMD3-BMI1R4GMX3 469 aa15.18■□□□□ 0.02
SRSF1-208ENST00000584773 IQCF6A8MYZ5 107 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 F5H5P2 479 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 J3QW42 95 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 LCATP04180 440 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 HLA-DPB1P04440 258 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 RAP2AP10114 183 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 ADRA2CP18825 462 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 GK2Q14410 553 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-208ENST00000584773 ZMYND11Q15326 602 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 SNAI3Q3KNW1 292 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 PEG10Q86TG7 708 aaKnown RBP15.17■□□□□ 0.02
SRSF1-208ENST00000584773 OR2T4Q8NH00 348 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 CANT1Q8WVQ1 401 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 SLCO4A1Q96BD0 722 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 MEGF10Q96KG7 1140 aa15.17■□□□□ 0.02
SRSF1-208ENST00000584773 ZNF582Q96NG8 517 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-208ENST00000584773 SLC30A2Q9BRI3 323 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms