RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 TIMM23BQ5SRD1 257 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 XKRXQ6PP77 449 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 Q6ZNX1 250 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 USP43Q70EL4 1123 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 KRT77Q7Z794 578 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 ZNF679Q8IYX0 411 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 WDR31Q8NA23 367 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 ZNF485Q8NCK3 441 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 KBTBD8Q8NFY9 601 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 OR10S1Q8NGN2 331 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 HAVCR2Q8TDQ0 301 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 CA5BP1Q8WTZ4 195 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 SPRYD4Q8WW59 207 aaPredicted RBP11.26□□□□□ -0.61
SPG7-209ENST00000564047 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 C4orf36Q96KX1 117 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 MROQ9BYG7 248 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 HDHD2Q9H0R4 259 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 ISG20L2Q9H9L3 353 aaKnown RBP11.26□□□□□ -0.61
SPG7-209ENST00000564047 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 DDX28Q9NUL7 540 aaKnown RBP11.26□□□□□ -0.61
SPG7-209ENST00000564047 TBCCD1Q9NVR7 557 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 SLCO1C1Q9NYB5 712 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 MRM2Q9UI43 246 aaKnown RBP11.26□□□□□ -0.61
SPG7-209ENST00000564047 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 AMDHD2Q9Y303 409 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
SPG7-209ENST00000564047 TACC2O95359 2948 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 HIVEP1P15822 2718 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ZNF503-AS2A6NEH8 195 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 WIPF3A6NGB9 483 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 J3QLW9 94 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ABHD16AO95870 558 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 WNT11O96014 354 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 H2BFMP0C1H6 154 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 COX5BP10606 129 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 CD79AP11912 226 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ZNF19P17023 458 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 NR4A1P22736 598 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 DCTDP32321 178 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 OR12D2P58182 307 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 VBP1P61758 197 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 NCS1P62166 190 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ECH1Q13011 328 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 MRPL28Q13084 256 aaKnown RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 MED22Q15528 200 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 GSG1Q2KHT4 349 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 TP53I3Q53FA7 332 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ARMCX4Q5H9R4 360 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 LRRN1Q6UXK5 716 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 FAM220AQ7Z4H9 259 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 ZNF808Q8N4W9 903 aaPredicted RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 NDNFQ8TB73 568 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 S100PBPQ96BU1 408 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 COQ7Q99807 217 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ATF6BQ99941 703 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 WNT5BQ9H1J7 359 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 NIPAL2Q9H841 368 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 MOV10Q9HCE1 1003 aaKnown RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
SPG7-209ENST00000564047 ATPIF1Q9UII2 106 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 FBXL3Q9UKT7 428 aa11.25□□□□□ -0.61
SPG7-209ENST00000564047 OR6C6A6NF89 314 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 PSMD9O00233 223 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 MAGEB4O15481 346 aaPredicted RBP11.24□□□□□ -0.61
SPG7-209ENST00000564047 SYNGR3O43761 229 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 DOK2O60496 412 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 CBR1P16152 277 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 RGS6P49758 472 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
SPG7-209ENST00000564047 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
SPG7-209ENST00000564047 GRB2P62993 217 aaKnown RBP11.24□□□□□ -0.61
SPG7-209ENST00000564047 BDH1Q02338 343 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 PLP2Q04941 152 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 TAF13Q15543 124 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 ZNF774Q6NX45 483 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 C16orf87Q6PH81 154 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 SPATC1Q76KD6 591 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 MDP1Q86V88 176 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 FAM169BQ8N8A8 192 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
SPG7-209ENST00000564047 OR1F12Q8NHA8 337 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms