RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 TRIP10Q15642 601 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 MOGQ16653 247 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 SPRNQ5BIV9 151 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 COLCA1Q6ZS62 124 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 BBS1Q8NFJ9 593 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 RDH5Q92781 318 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 APOBEC3DQ96AK3 386 aaPredicted RBP13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 C1QTNF5Q9BXJ0 243 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 MSL2Q9HCI7 577 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
CCNDBP1-203ENST00000562553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.312e-12■■■□□ 16.4
CCNDBP1-203ENST00000562553 PLSCR5A0PG75 271 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PRR23D1E9PI22 279 aaPredicted RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 H3BNX3 289 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 J3QW42 95 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 M0R129 80 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 CD5LO43866 347 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 CDC14BO60729 498 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 RP2O75695 350 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 MT-ND5P03915 603 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 HMGN1P05114 100 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PRR23D2P0DMB1 279 aaPredicted RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 KITLGP21583 273 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 EPHA2P29317 976 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 GSTT1P30711 240 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PRSS12P56730 875 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ECH1Q13011 328 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 HNRNPA0Q13151 305 aaKnown RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PCGF3Q3KNV8 242 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 TEX30Q5JUR7 227 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 Q6ZR03 302 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 HAVCR1Q96D42 359 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 SLAMF6Q96DU3 332 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 COG8Q96MW5 612 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 INTS14Q96SY0 518 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 MARCH7Q9H992 704 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 CHODLQ9H9P2 273 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZNF275Q9NSD4 429 aaPredicted RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 DDX28Q9NUL7 540 aaKnown RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 TMEFF2Q9UIK5 374 aaPredicted RBP13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 OAZ3Q9UMX2 235 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
CCNDBP1-203ENST00000562553 LRP5LA4QPB2 252 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 C5orf63A6NC05 138 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 M0R135 149 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 LILRA1O75019 489 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 RAC2P15153 192 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 ACHEP22303 614 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 SLC2A5P22732 501 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 TUBG1P23258 451 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 BLVRAP53004 296 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 PTGES3Q15185 160 aaKnown RBP13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 KLHL12Q53G59 568 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 FBXW12Q6X9E4 464 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 USP51Q70EK9 711 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 SPATC1Q76KD6 591 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 DPY19L4Q7Z388 723 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 OR5AS1Q8N127 324 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZNF540Q8NDQ6 660 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 CENPNQ96H22 339 aaPredicted RBP13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 AMELYQ99218 206 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 PKP2Q99959 881 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 CYSLTR2Q9NS75 346 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 CENPMQ9NSP4 180 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 CGGBP1Q9UFW8 167 aaPredicted RBP13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 DYSFO75923 2080 aa13.07□□□□□ -0.32
CCNDBP1-203ENST00000562553 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 SELENOFO60613 162 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 LCATP04180 440 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 ADH4P08319 380 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 TACSTD2P09758 323 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 ZNF16P17020 682 aaPredicted RBP13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 IL2RGP31785 369 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 OTX1P32242 354 aaPredicted RBP13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 LIPAP38571 399 aa13.06□□□□□ -0.32
CCNDBP1-203ENST00000562553 PRKXP51817 358 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms