RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MAGEB1P43366 347 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 PPICP45877 212 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 DIO1P49895 249 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 HGFACQ04756 655 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 BIKQ13323 160 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 PHB2Q99623 299 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 MKKSQ9NPJ1 570 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 CACFD1Q9UGQ2 172 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 PRUNE2Q8WUY3 3088 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 A0A087WUJ7 227 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 C17orf105B2RV13 164 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 H3BMH7 237 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 IFNA17P01571 189 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 TACSTD2P09758 323 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 NQO2P16083 231 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 ITGA3P26006 1051 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 RBP2P50120 134 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 CYCSP99999 105 aaKnown RBP12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF239Q16600 458 aaKnown RBP12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC25A42Q86VD7 318 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 OR10R2Q8NGX6 335 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 PTPMT1Q8WUK0 201 aaPredicted RBP12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 TMED6Q8WW62 240 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 LMF1Q96S06 567 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 MICU1Q9BPX6 476 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 LAT2Q9GZY6 243 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 CUTCQ9NTM9 273 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC2A8Q9NY64 477 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.4
RABGGTA-220ENST00000560998 ABCA7Q8IZY2 2146 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 TRAV18A0A075B6X5 111 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 PRKNO60260 465 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 NDUFB2O95178 105 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 PGAM2P15259 253 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 ZBTB25P24278 435 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 MPZP25189 248 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 PSMB6P28072 239 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 NAA10P41227 235 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 DVL1P1P54792 670 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 SPCS3P61009 180 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 MEF2DQ14814 521 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 REC114Q7Z4M0 266 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF440Q8IYI8 595 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 ZDHHC22Q8N966 263 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 CPNE2Q96FN4 548 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 FAM96BQ9Y3D0 163 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 MMACHCQ9Y4U1 282 aa12.52□□□□□ -0.41
RABGGTA-220ENST00000560998 SPAG17Q6Q759 2223 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 LOC390937A0A1W2PQ73 354 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 PIAS2O75928 621 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 AMY2AP04746 511 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 CRHP06850 196 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 RNF224P0DH78 156 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 ACKR3P25106 362 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 MAS1LP35410 378 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 SLC37A1P57057 533 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 OR1D5P58170 312 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 TTLL10Q6ZVT0 673 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF321PQ8N8H1 164 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 OR52E2Q8NGJ4 325 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 OR8S1Q8NH09 359 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 C3orf49Q96BT1 292 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 C14orf144Q96I85 54 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 SULT4A1Q9BR01 284 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 NMES1Q9C002 83 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 RPS10P5Q9NQ39 176 aa12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-220ENST00000560998 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 OIP5O43482 229 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 CD63P08962 238 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 HOXB5P09067 269 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 HIST1H1CP16403 213 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 HOXA5P20719 270 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 OR1D4P47884 311 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 CX3CR1P49238 355 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 NANOS3P60323 173 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 MED25Q71SY5 747 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 RHOUQ7L0Q8 258 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 SEC22AQ96IW7 307 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 PRRT1Q99946 306 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms