RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SSX1Q16384 188 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 GABRA6Q16445 453 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 MEP1BQ16820 701 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 LIPKQ5VXJ0 399 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 RNLSQ5VYX0 342 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ABLIM2Q6H8Q1 611 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF544Q6NX49 715 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ERI1Q8IV48 349 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 UBE2J2Q8N2K1 259 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF485Q8NCK3 441 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 NSMAFQ92636 917 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF385AQ96PM9 386 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 ALG8Q9BVK2 526 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 NDEL1Q9GZM8 345 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 VSX1Q9NZR4 365 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 KCNS2Q9ULS6 477 aa9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 COA3Q9Y2R0 106 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 EXOSC1Q9Y3B2 195 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-204ENST00000558376 IRGMA1A4Y4 181 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF716A6NP11 495 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 PRR32B1ATL7 298 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 E9PI62 339 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 FZD7O75084 574 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 HLA-DQA2P01906 255 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ITGA5P08648 1049 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 GADD45AP24522 165 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CLDN17P56750 224 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 OR12D2P58182 307 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 VBP1P61758 197 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CSNK2A1P68400 391 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 GGTLC2Q14390 218 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CTF1Q16619 201 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 PLEKHG7Q6ZR37 379 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF367Q7RTV3 350 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 KLBQ86Z14 1044 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SLC35F2Q8IXU6 374 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 OR2T4Q8NH00 348 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 FCGR1BQ92637 280 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 TMEM203Q969S6 136 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CNN2Q99439 309 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 DCUN1D5Q9BTE7 237 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 OR51E2Q9H255 320 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 KLHDC2Q9Y2U9 406 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 NOX1Q9Y5S8 564 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SIRT4Q9Y6E7 314 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 IGHV4-61A0A0C4DH41 118 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 J3QLW9 94 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SCG5P05408 212 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CSF3P09919 207 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF19P17023 458 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 NR4A2P43354 598 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 DAP3P51398 398 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SH3BGRP55822 239 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 WNT4P56705 351 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 NCS1P62166 190 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SPCS2Q15005 226 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 TP53I3Q53FA7 332 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 SLC35D3Q5M8T2 416 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 FAM166AQ6J272 317 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF322Q6U7Q0 402 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 CREB3L2Q70SY1 520 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 DPY19L4Q7Z388 723 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ADCK1Q86TW2 530 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZBTB46Q86UZ6 589 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ANKRD13BQ86YJ7 626 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 ZIC4Q8N9L1 334 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 APH1AQ96BI3 265 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 MRPL13Q9BYD1 178 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 RACGAP1Q9H0H5 632 aa9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 MRPL22Q9NWU5 206 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 NOSIPQ9Y314 301 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-204ENST00000558376 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 LOC100506127A0A0U1RQW1 187 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 A0A1W2PPW3 197 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 TMEM129A0AVI4 362 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 ZNF593O00488 134 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 EIF1BO60739 113 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 APOBEC3AP31941 199 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 PDLIM4P50479 330 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 TMBIM6P55061 237 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 TMED1Q13445 227 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 GALEQ14376 348 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 SLC17A1Q14916 467 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 SWI5Q1ZZU3 235 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 PHYHD1Q5SRE7 291 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 C9orf135Q5VTT2 229 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 TIGD4Q8IY51 512 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 KLHL36Q8N4N3 616 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 ADPRHL1Q8NDY3 354 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 OR9K2Q8NGE7 335 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 C4orf36Q96KX1 117 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 AMELYQ99218 206 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 CHCHD6Q9BRQ6 235 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 NAA11Q9BSU3 229 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 ENPP5Q9UJA9 477 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 MOKQ9UQ07 419 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 PMF1-BGLAPU3KQ54 211 aa9.67□□□□□ -0.86
RABGGTA-204ENST00000558376 A6NIZ1 184 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms