RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 TRAPPC2LQ9UL33 140 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CA5BQ9Y2D0 317 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 HDGFL3Q9Y3E1 203 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 FAM183AA6NL82 134 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 ORM1P02763 201 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CHRM4P08173 479 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 PPP1CAP62136 330 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CDK5Q00535 292 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 ETFRF1Q6IPR1 90 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 MRGPRGQ86SM5 289 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CA13Q8N1Q1 262 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 KLHDC1Q8N7A1 406 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 NEIL1Q96FI4 390 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 SLC35E1Q96K37 410 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 TRAF4Q9BUZ4 470 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 STARD5Q9NSY2 213 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 LYRM2Q9NU23 88 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-211ENST00000543710 CBY1Q9Y3M2 126 aa7.11□□□□□ -1.27
VPS13D-211ENST00000543710 J3QR89 54 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PIP5K1CO60331 668 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PIANPQ8IYJ0 282 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 LILRA2Q8N149 483 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 GABRG1Q8N1C3 465 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ARRDC1Q8N5I2 433 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ANKRD53Q8N9V6 530 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 LKAAEAR1Q8TD35 194 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SSC4DQ8WTU2 575 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MS4A6EQ96DS6 147 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TVP23CQ96ET8 276 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DNAJA3Q96EY1 480 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TXNIPQ9H3M7 391 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF629Q9UEG4 869 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 A0A0A6YYD5 115 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 RFPL4AA6NLU0 287 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 RFPL4AL1F8VTS6 287 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ST8SIA3O43173 380 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 YIF1AO95070 293 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ATF1P18846 271 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DRD5P21918 477 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PSMB10P40306 273 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ADPRHP54922 357 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 UBE2G2P60604 165 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 POU3F1Q03052 451 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MADCAM1Q13477 382 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SOHLH1Q5JUK2 328 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 Q6ZSR9 355 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SLC35D2Q76EJ3 337 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 NRARPQ7Z6K4 114 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 LINC00346Q8IVM7 164 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SLC38A9Q8NBW4 561 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DMBX1Q8NFW5 382 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 OR51S1Q8NGJ8 323 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 OR5H6Q8NGV6 325 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DEFB127Q9H1M4 99 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 CDCP1Q9H5V8 836 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF225Q9UK10 706 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 KCNE1BA0A087WTH5 132 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 A0A1W2PPK0 400 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 HMSDA8MTL9 139 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 B4DEV8 164 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 F7P08709 466 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TBXA2RP21731 343 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DPP4P27487 766 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 WNT7BP56706 349 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TAS1R1Q7RTX1 841 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 CCDC190Q86UF4 302 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 BAHD1Q8TBE0 780 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SP7Q8TDD2 431 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TOMM40LQ969M1 308 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SEH1LQ96EE3 360 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 KCNK17Q96T54 332 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TTTY10Q9BZA0 68 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 GAR1Q9NY12 217 aaKnown RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 EXO1Q9UQ84 846 aaKnown RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MSRB2Q9Y3D2 182 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 FLVCR1Q9Y5Y0 555 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MYOCOSA0A1B0GUC4 107 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TRIM77I1YAP6 450 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 J3KTA2 159 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DVL1O14640 695 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PTHLHP12272 177 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 APEHP13798 732 aaKnown RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 CSN1S1P47710 185 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 FUT6P51993 359 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 CTSCP53634 463 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DVL1P1P54792 670 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DEGS2Q6QHC5 323 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 SOX7Q9BT81 388 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TEX101Q9BY14 249 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MARCH5Q9NX47 278 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 C5AR2Q9P296 337 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 COPS3Q9UNS2 423 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PIGLQ9Y2B2 252 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 A0A0A6YYC8 382 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 I3L1I5 382 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF195O14628 629 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms