RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 P4HTMQ9NXG6 502 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF319Q9P2F9 582 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ELF5Q9UKW6 265 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-204ENST00000543140 CELSR3Q9NYQ7 3312 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 RFPL3SP0C7P2 107 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 RAD52P43351 418 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 CSNK1A1P48729 337 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 PSMA6P60900 246 aaKnown RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ACER2Q5QJU3 275 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 LIX1LQ8IVB5 337 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 LRRC18Q8N456 261 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 OR13C9Q8NGT0 318 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 OR14L1PQ8NHC6 308 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 DVL3Q92997 716 aaPredicted RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 TAAR9Q96RI9 348 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 SRXN1Q9BYN0 137 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 CNTD2Q9H8S5 307 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 STMN3Q9NZ72 180 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 FOXJ2Q9P0K8 574 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 PCDHGA5Q9Y5G8 931 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 C9orf172C9J069 976 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ICAM2P13598 275 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ANXA7P20073 488 aaKnown RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 SELENOPP49908 381 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 OC90Q02509 493 aaPredicted RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 SSPNQ14714 243 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 MOGAT2Q3SYC2 334 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ELFN2Q5R3F8 820 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF813Q6ZN06 617 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 Q6ZTK2 550 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ABHD12BQ7Z5M8 362 aaPredicted RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 ADGRE4PQ86SQ3 457 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 OR9K2Q8NGE7 335 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 OR4C16Q8NGL9 310 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 NTNG2Q96CW9 530 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 SPACA5Q96QH8 159 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 PIGQQ9BRB3 760 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 SEC22CQ9BRL7 303 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 B3GNT4Q9C0J1 378 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 PNRC2Q9NPJ4 139 aaKnown RBP14.44□□□□□ -0.1
COL4A1-204ENST00000543140 HSPB11Q9Y547 144 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 R4GN57 208 aa14.44□□□□□ -0.1
COL4A1-204ENST00000543140 A0A1B0GTI1 187 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 A0A1B0GVI7 797 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 A0A1W2PNU3 283 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 EIF1BO60739 113 aaKnown RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 GTF2F2P13984 249 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 ABOP16442 354 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 BDKRB2P30411 391 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 RAC1P63000 192 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 BEST3Q8N1M1 668 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 ARMC10Q8N2F6 343 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 OR8B12Q8NGG6 310 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 FAM46BQ96A09 425 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 TMEM41AQ96HV5 264 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 RBM24Q9BX46 236 aaKnown RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 SLC17A5Q9NRA2 495 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 TRAPPC6AO75865 159 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 HPP00738 406 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 ANXA3P12429 323 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 CD59P13987 128 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 CX3CR1P49238 355 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 CSNK2A1P68400 391 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 TNK1Q13470 666 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 DMRTC1Q5HYR2 192 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 LAMTOR1Q6IAA8 161 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 FAM57BQ71RH2 274 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 RNF144BQ7Z419 303 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 NAA40Q86UY6 237 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF283Q8N7M2 679 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 OR1M1Q8NGA1 313 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 FAM71F1Q96KD3 344 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 SORCS2Q96PQ0 1159 aa14.43□□□□□ -0.1
COL4A1-204ENST00000543140 NAA11Q9BSU3 229 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-204ENST00000543140 CD37P11049 281 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 GUCA1AP43080 201 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-204ENST00000543140 STARP49675 285 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 C1orf100Q5SVJ3 147 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF782Q6ZMW2 699 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-204ENST00000543140 NKAIN3Q8N8D7 197 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ACBD4Q8NC06 268 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 GPR84Q9NQS5 396 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 DEPPQ9NTK1 212 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 SLC5A6Q9Y289 635 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 C5orf63A6NC05 138 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 TPPPO94811 219 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 CD3DP04234 171 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 CD63P08962 238 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF20P17024 532 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 B3GALT5-AS1P59052 145 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 CHAF1BQ13112 559 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 KCNMB1Q16558 191 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 LYPD6Q86Y78 171 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 OR5D14Q8NGL3 314 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 DEDD2Q8WXF8 326 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF837Q96EG3 531 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-204ENST00000543140 TMEM138Q9NPI0 162 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ITGB1BP2Q9UKP3 347 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 ING4Q9UNL4 249 aa14.42□□□□□ -0.1
COL4A1-204ENST00000543140 RHBDD3Q9Y3P4 386 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms