RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 OR52B4Q8NGK2 314 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 HES7Q9BYE0 225 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 DLL3Q9NYJ7 618 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 COPS3Q9UNS2 423 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 PRRC2CQ9Y520 2896 aaKnown RBP13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 PSMD9O00233 223 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 PIN1P1O15428 100 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 CD82P27701 267 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 DCTDP32321 178 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 RFC3P40938 356 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 CENPAP49450 140 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC25A1P53007 311 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 AP3S2P59780 193 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 POMGNT2Q8NAT1 580 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 OR6S1Q8NH40 331 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 DMRTA2Q96SC8 542 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 MED9Q9NWA0 146 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 A0A087WZY1 265 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 PRSS37A4D1T9 235 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 OR6C65A6NJZ3 312 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ACOD1A6NK06 481 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ANXA2P2A6NMY6 339 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 KRBOX1C9JBD0 128 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ARPC5O15511 151 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 OR2A4O95047 310 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 WDPCPO95876 746 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 FCER2P06734 321 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 S100A11P31949 105 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 PTH2RP49190 550 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ETFDHQ16134 617 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF626Q68DY1 528 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 SNX33Q8WV41 574 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 FER1L6-AS2Q96M78 137 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 OR2A7Q96R45 310 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 EMC6Q9BV81 110 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 MFRPQ9BY79 579 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 PFDN2Q9UHV9 154 aa13.6□□□□□ -0.23
CLPTM1-202ENST00000541297 ANKRD20A5PA0PJZ0 165 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 IFITM5A6NNB3 132 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 NPIPA5E9PKD4 350 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 NKX2-8O15522 239 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 NEURL1O76050 574 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SIX6O95475 246 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 CAPZA2P47755 286 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SEC61A1P61619 476 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 IP6K3Q96PC2 410 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 TMPRSS13Q9BYE2 586 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 TSPAN10Q9H1Z9 355 aaPredicted RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 NPIPA1Q9UND3 350 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SULT2B1O00204 365 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC16A7O60669 478 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 RAMP1O60894 148 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 OR2T7P0C7T2 308 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 LIPCP11150 499 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 HSF1Q00613 529 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 RPL22L1Q6P5R6 122 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 TMUB2Q71RG4 321 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC35D2Q76EJ3 337 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 OR2T27Q8NH04 317 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 OR14L1PQ8NHC6 308 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SYNPRQ8TBG9 265 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SCARB1Q8WTV0 552 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC25A43Q8WUT9 341 aaPredicted RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 WDR76Q9H967 626 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 B3GALT5Q9Y2C3 310 aa13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 H0YC42 278 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 AIPO00170 330 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 PDCD5O14737 125 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 RP2O75695 350 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 B3GALNT1O75752 331 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 CASRP41180 1078 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 EEF1A1P5Q5VTE0 462 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 UNQ9370/PRO34162Q6UXP9 181 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 ARL6Q9H0F7 186 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 GPN1Q9HCN4 374 aaPredicted RBP13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 FOXJ3Q9UPW0 622 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 IGHMP01871 453 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 FGF2P09038 288 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 CTLA4P16410 223 aa13.58□□□□□ -0.24
CLPTM1-202ENST00000541297 ACTA2P62736 377 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms