RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SLC7A13Q8TCU3 470 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 FAR1Q8WVX9 515 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 GLYATL1Q969I3 302 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PINX1Q96BK5 328 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 MCEEQ96PE7 176 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 OR2M4Q96R27 311 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TNFRSF13CQ96RJ3 184 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TMPRSS13Q9BYE2 586 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SLC17A9Q9BYT1 436 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ULBP2Q9BZM5 246 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 DPAGT1Q9H3H5 408 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ACTR8Q9H981 624 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 HHATLQ9HCP6 504 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ELOVL5Q9NYP7 299 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 CNOT2Q9NZN8 540 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 OR6C3Q9NZP0 311 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 POMT2Q9UKY4 750 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 EMCNQ9ULC0 261 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 FARSAQ9Y285 508 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PIGLQ9Y2B2 252 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 COA3Q9Y2R0 106 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 DMXL2Q8TDJ6 3036 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 A0A1W2PQM1 296 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TCRBV5S1A1TA0A578 114 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF99A8MXY4 864 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 P2RY10O00398 339 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SLC31A1O15431 190 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ST8SIA3O43173 380 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 KLK10O43240 276 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SYNGR3O43761 229 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SOX15O60248 233 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CTSVO60911 334 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ANXA9O76027 345 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 LRATO95237 230 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 IGHG3P01860 377 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 RLN1P04808 185 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 OR5AC1P0C628 307 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 FAM87AP0C7U9 286 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 DRD2P14416 443 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 GGT1P19440 569 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 BMP5P22003 454 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 RBMS1P29558 406 aaKnown RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PTPN7P35236 360 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SLC19A1P41440 591 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 MTNR1BP49286 362 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 KLK7P49862 253 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CTSCP53634 463 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 GEMP55040 296 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PIGPP57054 158 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 RAB8AP61006 207 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 RHOAP61586 193 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 POLR2LP62875 67 aaKnown RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 RHOGP84095 191 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PAX2Q02962 417 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CAV1Q03135 178 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 OR5I1Q13606 314 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TPBGQ13641 420 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TAF13Q15543 124 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 NEDD8Q15843 81 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 POM121L1PQ3SYA9 428 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF585BQ52M93 769 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CD276Q5ZPR3 534 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM107Q6UX40 140 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SLCO4C1Q6ZQN7 724 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TMPPEQ6ZT21 453 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TTLL10Q6ZVT0 673 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 OR2W3Q7Z3T1 314 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PTAR1Q7Z6K3 402 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SLC30A8Q8IWU4 369 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SHISA5Q8N114 240 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 EID2Q8N6I1 236 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PNPLA1Q8N8W4 532 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ZSCAN4Q8NAM6 433 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CLEC1AQ8NC01 280 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 JOSD2Q8TAC2 188 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TADA1Q96BN2 335 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PYCR2Q96C36 320 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CCDC126Q96EE4 140 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 COQ2Q96H96 371 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 JSRP1Q96MG2 331 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 WDFY2Q96P53 400 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TP53RKQ96S44 253 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SYT11Q9BT88 431 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 ADI1Q9BV57 179 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 TXNIPQ9H3M7 391 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 IL17CQ9P0M4 197 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 EXOSC1Q9Y3B2 195 aaKnown RBP6.75□□□□□ -1.33
HDAC3-216ENST00000523088 SNX10Q9Y5X0 201 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 LRRK1Q38SD2 2015 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 CHD6Q8TD26 2715 aa6.75□□□□□ -1.33
HDAC3-216ENST00000523088 PPIAL4EA0A075B759 164 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 LOC105369274A0A096LPK9 316 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms