RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FAF2Q96CS3 445 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 C10orf35Q96D05 121 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 POM121L2Q96KW2 1035 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF597Q96LX8 424 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CLCC1Q96S66 551 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 CHP1Q99653 195 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR2AG1Q9H205 316 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ASB8Q9H765 288 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 SCRT2Q9NQ03 307 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 NECAP2Q9NVZ3 263 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF282Q9UDV7 671 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF639Q9UID6 485 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSMD13Q9UNM6 376 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 PROCRQ9UNN8 238 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 AK6Q9Y3D8 172 aaKnown RBP3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 TIMM10BQ9Y5J6 103 aa3.7□□□□□ -1.82
HMGB1P23-201ENST00000518743 IGHV3-16A0A0C4DH30 117 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 CLOCKO15516 846 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 DUS4LO95620 317 aaKnown RBP3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 SOD1P00441 154 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 IGHG4P01861 327 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 HLA-DRAP01903 254 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 SOD3P08294 240 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF7P17097 686 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 PCMT1P22061 227 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 STARP49675 285 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ATP4BP51164 291 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 DIO3P55073 304 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 UBA52P62987 128 aaKnown RBP3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 GBE1Q04446 702 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF154Q13106 437 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 IL18Q14116 193 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 C17orf58Q2M2W7 97 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 CCDC14Q49A88 953 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 PDZK1Q5T2W1 519 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 STXBP4Q6ZWJ1 553 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 COX15Q7KZN9 410 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF550Q7Z398 422 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 SERPINA9Q86WD7 417 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 CSNK1G2-AS1Q8NCQ2 148 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR51G2Q8NGK0 314 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR9A4Q8NGU2 314 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF671Q8TAW3 534 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 KCTD4Q8WVF5 259 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 SPATA16Q9BXB7 569 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 CDC42EP4Q9H3Q1 356 aaKnown RBP3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 NEK6Q9HC98 313 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 RAB18Q9NP72 206 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 IL36GQ9NZH8 169 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 DPM3Q9P2X0 92 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 ONECUT1Q9UBC0 465 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 TMCO1Q9UM00 188 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 WIF1Q9Y5W5 379 aa3.69□□□□□ -1.82
HMGB1P23-201ENST00000518743 SCN3AQ9NY46 2000 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 A0A1B0GVL5 298 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 LRRIQ3A6PVS8 624 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 C9JVG2 144 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 E9PLD3 99 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 G3V3Y1 287 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 L7N2F9 121 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PES1O00541 588 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 KMOO15229 486 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SRPX2O60687 465 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF354AO60765 605 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 CA1P00915 261 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ALOX5P09917 674 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC35E2P0CK97 266 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 BCL3P20749 454 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 MDKP21741 143 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 GCAP28676 217 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRDX3P30048 256 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 MAP3K8P41279 467 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ALDH3B2P48448 385 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 CRMP1Q14194 572 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 KCNJ11Q14654 390 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ARHGAP19Q14CB8 494 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PPP1R3AQ16821 1122 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 BEX5Q5H9J7 111 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 OTUD3Q5T2D3 398 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 KPRPQ5T749 579 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR2A2Q6IF42 318 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 RWDD4Q6NW29 188 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 TMEM107Q6UX40 140 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 GDPD3Q7L5L3 318 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRSS48Q7RTY5 328 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC26A11Q86WA9 606 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 FAM184AQ8NB25 1140 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR1L4Q8NGR5 311 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 TSEN15Q8WW01 171 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 STMN2Q93045 179 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 UBE2E3Q969T4 207 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC38A2Q96QD8 506 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SYT11Q9BT88 431 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 RIOK2Q9BVS4 552 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZYG11BQ9C0D3 744 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SRMSQ9H3Y6 488 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 YY1AP1Q9H869 796 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 HEXA-AS1Q9H8Q6 139 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms