RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 IQCF3P0C7M6 154 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 RPA2P15927 270 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 HLA-DMAP28067 261 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 POLR2IP36954 125 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 GPX4P36969 197 aaPredicted RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 MDH1P40925 334 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 GRIA1P42261 906 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 CCT3P49368 545 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 KLF3P57682 345 aaPredicted RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 PDZD11Q5EBL8 140 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 ANKRD26P1Q6NSI1 321 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 PDIK1LQ8N165 341 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 NPWQ8N729 165 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 GPR26Q8NDV2 337 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 OR1S2Q8NGQ3 325 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 RNASE11Q8TAA1 199 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 RHEBL1Q8TAI7 183 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 UBE2Q2Q8WVN8 375 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 DCPSQ96C86 337 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 OTUB2Q96DC9 234 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 SENP8Q96LD8 212 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 TCEANC2Q96MN5 208 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 NUDT9Q9BW91 350 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 ZNF442Q9H7R0 627 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 TMEM9BQ9NQ34 198 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 FBXO8Q9NRD0 319 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 RWDD2AQ9UIY3 292 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 ADAM28Q9UKQ2 775 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 FARSAQ9Y285 508 aaKnown RBP0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 PIGLQ9Y2B2 252 aa0.2□□□□□ -2.38
SNORA40.14-201ENST00000516543 A0A0J9YXV3 536 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 D6RAR5 112 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 PLPP1O14494 284 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 NUPL2O15504 423 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 EIF4E2O60573 245 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 SURF6O75683 361 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 SCGNO76038 276 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 CGB3P0DN86 165 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 GGT1P19440 569 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 OTX1P32242 354 aaPredicted RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 ATP6V1E1P36543 226 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 TAS2R43P59537 309 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 YWHAGP61981 247 aaKnown RBP eCLIP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 C2orf54Q08AI8 447 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 NCF4Q15080 339 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 INAQ16352 499 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 TPD52L1Q16890 204 aaPredicted RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 LIN9Q5TKA1 542 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 LRRC74BQ6ZQY2 392 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 SLC26A10Q8NG04 563 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 OR2T34Q8NGX1 318 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 SLC2A14Q8TDB8 520 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 GHSRQ92847 366 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 PKNOX2Q96KN3 472 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 THUMPD2Q9BTF0 503 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 TMEM27Q9HBJ8 222 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 FARSBQ9NSD9 589 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 ACTR3BQ9P1U1 418 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 PTBP2Q9UKA9 531 aaKnown RBP0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 MUC5ACP98088 5654 aa0.19□□□□□ -2.38
SNORA40.14-201ENST00000516543 IGKV1-27A0A075B6S5 117 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 EEDO75530 441 aaKnown RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 IGHMP01871 453 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 ERGP11308 486 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 KRT13P13646 458 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 STMN1P16949 149 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 MAPK3P27361 379 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 RBM34P42696 430 aaKnown RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 MAGEA8P43361 318 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 TGM4P49221 684 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 RPS23P62266 143 aaKnown RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 ILKQ13418 452 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 PNOCQ13519 176 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 QPRTQ15274 297 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 SS18Q15532 418 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 CCDC92Q53HC0 331 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 LDLRAD2Q5SZI1 272 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 GPR107Q5VW38 600 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 MS4A15Q8N5U1 240 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 FAM83FQ8NEG4 500 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 SDR9C7Q8NEX9 313 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 OR4F6Q8NGB9 312 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 TMEM243Q9BU79 118 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 GOLT1BQ9Y3E0 138 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 SSH2Q76I76 1423 aa0.18□□□□□ -2.38
SNORA40.14-201ENST00000516543 IGHV1-69DA0A0B4J2H0 117 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 TRGV4A0A0C4DH28 118 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 GLYATL1P3A0A0U1RQE8 302 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 CLRN2A0PK11 232 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 GOLGA8SH3BPF8 625 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 PSTPIP1O43586 416 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 CLPXO76031 633 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 SLC35G6P0C7Q6 338 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 THRAP10827 490 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 PRKACBP22694 351 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 CSNK1EP49674 416 aaKnown RBP0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 BTN1A1Q13410 526 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 ZNF726P1Q15940 193 aa0.17□□□□□ -2.38
SNORA40.14-201ENST00000516543 NADK2Q4G0N4 442 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms