RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 G6PC2Q9NQR9 355 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 GTF2A1LQ9UNN4 478 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 KPTNQ9Y664 436 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 LOC107986453A0A1B0GWG9 222 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SCDO00767 359 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 FARS2O95363 451 aaKnown RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 SFT2D2O95562 160 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 CSTBP04080 98 aaKnown RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 S100PP25815 95 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 INSM1Q01101 510 aaPredicted RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 SPOCK1Q08629 439 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 EIF2S3LQ2VIR3 472 aaKnown RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 FAM209BQ5JX69 171 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 DEGS2Q6QHC5 323 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 CBLN3Q6UW01 205 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 MDGA2Q7Z553 956 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 ZFP82Q8N141 532 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 TERB2Q8NHR7 220 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 ARL5BQ96KC2 179 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SCGB3A2Q96PL1 93 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 TAAR9Q96RI9 348 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 NKX3-1Q99801 234 aaPredicted RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 GAL3ST1Q99999 423 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 CCDC3Q9BQI4 270 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 PDE7BQ9NP56 450 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 CACNA1IQ9P0X4 2223 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 GPR132Q9UNW8 380 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 CPAMD8Q8IZJ3 1885 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 K7EQS6 105 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 TNFRSF10CO14798 259 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 YKT6O15498 198 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 HPGDP15428 266 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 GDI1P31150 447 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 CCR4P51679 360 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 DVL1P1P54792 670 aaPredicted RBP15.87■□□□□ 0.13
NUP54-205ENST00000507257 SEC13P55735 322 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 RUNX3Q13761 415 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 EIF2B1Q14232 305 aaKnown RBP15.87■□□□□ 0.13
NUP54-205ENST00000507257 NNATQ16517 81 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 NSUN5P2Q63ZY6 315 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 GVQW1Q8N7I0 195 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 CCL4L1Q8NHW4 92 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 LYPD6BQ8NI32 183 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 HIST1H2BAQ96A08 127 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 TXNIPQ9H3M7 391 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 HRH4Q9H3N8 390 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 PRTFDC1Q9NRG1 225 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 FAM96BQ9Y3D0 163 aa15.87■□□□□ 0.13
NUP54-205ENST00000507257 POM121BA6NF01 834 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 MSGN1A6NI15 193 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CLDN4O14493 209 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 SLC31A1O15431 190 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CLPSP04118 112 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 APODP05090 189 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CSNK1EP49674 416 aaKnown RBP15.86■□□□□ 0.13
NUP54-205ENST00000507257 F2RL1P55085 397 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 IL15RAQ13261 267 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 UNC119Q13432 240 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 OR52W1Q6IF63 320 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 MED25Q71SY5 747 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 GATSQ8NAP1 163 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CNTD2Q9H8S5 307 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 SLC22A11Q9NSA0 550 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CACFD1Q9UGQ2 172 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 OR52A1Q9UKL2 312 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 TRBV23OR9-2A0A075B6M9 112 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 KCNAB3O43448 404 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 SLC16A7O60669 478 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 S100A6P06703 90 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CHRM2P08172 466 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 ZNF806P0C7X5 589 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 ZNF44P15621 663 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 CRABP1P29762 137 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 ACKR1Q16570 336 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 PCK2Q16822 640 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 PEG10Q86TG7 708 aaKnown RBP15.86■□□□□ 0.13
NUP54-205ENST00000507257 KDM8Q8N371 416 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 SLC22A24Q8N4F4 322 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 ZNF563Q8TA94 476 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 MARCH1Q8TCQ1 289 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 ELF4Q99607 663 aaPredicted RBP15.86■□□□□ 0.13
NUP54-205ENST00000507257 FLVCR1Q9Y5Y0 555 aa15.86■□□□□ 0.13
NUP54-205ENST00000507257 LOC100509620A0A075B734 347 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 SSX5O60225 188 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 ICOSLGO75144 302 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 TIMP1P01033 207 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 GSTP1P09211 210 aaKnown RBP15.85■□□□□ 0.13
NUP54-205ENST00000507257 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
NUP54-205ENST00000507257 HGFACQ04756 655 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 GLO1Q04760 184 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 BIKQ13323 160 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 TOMM34Q15785 309 aaPredicted RBP15.85■□□□□ 0.13
NUP54-205ENST00000507257 PRTGQ2VWP7 1150 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 IGSF11Q5DX21 431 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 FAM76BQ5HYJ3 339 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 NAA40Q86UY6 237 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 ANGPTL5Q86XS5 388 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 COMMD1Q8N668 190 aa15.85■□□□□ 0.13
NUP54-205ENST00000507257 CHST4Q8NCG5 386 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms