RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PRPSAP1Q14558 356 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM249Q2WGJ8 235 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 KLF17Q5JT82 389 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 VAX1Q5SQQ9 334 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 FRMPD2BQ6IN97 320 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 Q6ZVH6 145 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 USP50Q70EL3 339 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 CDC20BQ86Y33 519 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAB43Q86YS6 212 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 SKA3Q8IX90 412 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 MDS2Q8NDY4 140 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR5D18Q8NGL1 313 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR5AR1Q8NGP9 310 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 ERMNQ8TAM6 284 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 LMO3Q8TAP4 145 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 AGAP11Q8TF27 550 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 GEMIN6Q8WXD5 167 aaKnown RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM234Q8WY98 164 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 RORBQ92753 470 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 DGCR14Q96DF8 476 aaKnown RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF597Q96LX8 424 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF488Q96MN9 340 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 COL21A1Q96P44 957 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 BARHL1Q9BZE3 327 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 POLR2J2Q9GZM3 115 aaKnown RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 POLR2J3Q9H1A7 115 aaKnown RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 DHX35Q9H5Z1 703 aaKnown RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 JPT2Q9H910 190 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 PLGRKTQ9HBL7 147 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 DPM3Q9P2X0 92 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 THAP10Q9P2Z0 257 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 SHPKQ9UHJ6 478 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 TFR2Q9UP52 801 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF256Q9Y2P7 627 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 KLF12Q9Y4X4 402 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 WIF1Q9Y5W5 379 aa2.91□□□□□ -1.94
HMGB1P22-201ENST00000505315 IGHV3OR16-13A0A075B7E8 117 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 FAM240AA0A1B0GVK7 77 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ZNF726A6NNF4 738 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 NCBP2LA6PVI3 153 aaKnown RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ERVV-1B6SEH8 477 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 H7C1H1 209 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 J3QLI3 93 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 K7ENP7 123 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 PFDN6O15212 129 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 FABP7O15540 132 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 CRXO43186 299 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ERI3O43414 337 aaKnown RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 SNAP91O60641 907 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 SRP72O76094 671 aaKnown RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 OXTP01178 125 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 RLN2P04090 185 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ZSCAN5DPP0CG00 497 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 LIMS3P0CW19 117 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 LIMS4P0CW20 117 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 T-ENOLP0DO92 83 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 F2RP25116 425 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 LMO2P25791 158 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 HSD11B1P28845 292 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 GRPRP30550 384 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 IL2RGP31785 369 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 KIR2DS4P43632 304 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 FABP6P51161 128 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 CAV2P51636 162 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 NKX2-5P52952 324 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 AQP5P55064 265 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 OR12D2P58182 307 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ACTBP60709 375 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 RAB8AP61006 207 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 LMO4P61968 165 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ACTG1P63261 375 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 IL5RAQ01344 420 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 RPL18AQ02543 176 aaKnown RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 COL10A1Q03692 680 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 C2orf54Q08AI8 447 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 TCP10Q12799 353 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 NAB1Q13506 487 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 AQP6Q13520 282 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ARFRP1Q13795 201 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 PSG5Q15238 335 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 TGIF1Q15583 401 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 CCL14Q16627 93 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 C17orf58Q2M2W7 97 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 TFDP3Q5H9I0 405 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 GCSAMLQ5JQS6 135 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ZNF506Q5JVG8 444 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ADAMTSL4-AS1Q5T5F5 129 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 FHL5Q5TD97 284 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 STPG1Q5TH74 334 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 C1orf146Q5VVC0 180 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 LCN12Q6JVE5 192 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 NIPAL1Q6NVV3 410 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 WDR74Q6RFH5 385 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 PRSS41Q7RTY9 318 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 PEX26Q7Z412 305 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 TMEM25Q86YD3 366 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 CBLN2Q8IUK8 224 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 TRAPPC5Q8IUR0 188 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 ENTHD1Q8IYW4 607 aa2.9□□□□□ -1.95
HMGB1P22-201ENST00000505315 HS3ST5Q8IZT8 346 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms