RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 ARPC3O15145 178 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 IDH3BO43837 385 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 IRF2P14316 349 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 HIST1H1CP16403 213 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 ZNF823P16415 610 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 ATP6V1B2P21281 511 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 FPR3P25089 353 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 MXRA7P84157 204 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 ECH1Q13011 328 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 MALLQ13021 153 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OR2T2Q6IF00 324 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 C16orf89Q6UX73 402 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 CFAP77Q6ZQR2 320 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 PIGWQ7Z7B1 504 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 PGAM4Q8N0Y7 254 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OR6V1Q8N148 313 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OR52L1Q8NGH7 329 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OR4K13Q8NH42 304 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 ZMYND19Q96E35 227 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 CDRT15Q96T59 188 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 NMNAT3Q96T66 252 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 TMEM100Q9NV29 134 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 VNN3Q9NY84 501 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OPN4Q9UHM6 478 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 AUP1Q9Y679 476 aa11.28□□□□□ -0.6
CTDSP1-212ENST00000494067 OR6C68A6NDL8 312 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 F5H5K5 113 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 H0YL77 283 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 CFPP27918 469 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 RRM2P31350 389 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC6A9P48067 706 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 GSSP48637 474 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 RAD23AP54725 363 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 GNGT1P63211 74 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 COX10Q12887 443 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 KRTAP27-1Q3LI81 207 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 RPL13AP3Q6NVV1 102 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 PGBD2Q6P3X8 592 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 LYPD4Q6UWN0 246 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 ATF6BQ99941 703 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 PLA2G12AQ9BZM1 189 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 GCM1Q9NP62 436 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 PNRC2Q9NPJ4 139 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 RPRD1BQ9NQG5 326 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 MIOXQ9UGB7 285 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 TAGLN3Q9UI15 199 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 NUP50Q9UKX7 468 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 LRCH1Q9Y2L9 728 aa11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 NOP16Q9Y3C1 178 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-212ENST00000494067 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 C5orf63A6NC05 138 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 MLNRO43193 412 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 KRT36O76013 467 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 MMP16P51512 607 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 MNAT1P51948 309 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 TPTEP56180 551 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 GNB2P62879 340 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 HOXA4Q00056 320 aaPredicted RBP11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 PPP1R8Q12972 351 aaKnown RBP11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 TSPAN31Q12999 210 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF154Q13106 437 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC18B1Q6NT16 456 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF620Q6ZNG0 422 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 NLRC3Q7RTR2 1065 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 NAA40Q86UY6 237 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 DEFB107AQ8IZN7 70 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 LINC00471Q8N535 108 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 BHLHE23Q8NDY6 225 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 SDR9C7Q8NEX9 313 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 OR10AD1Q8NGE0 317 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 OR9Q2Q8NGE9 314 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 OR8D4Q8NGM9 314 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 OR10S1Q8NGN2 331 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 SPTSSAQ969W0 71 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 MEGF10Q96KG7 1140 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 DDOQ99489 341 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 EGLN3Q9H6Z9 239 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 WDR76Q9H967 626 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 MRPL22Q9NWU5 206 aaKnown RBP11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 KCNG2Q9UJ96 466 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 INSIG2Q9Y5U4 225 aa11.26□□□□□ -0.61
CTDSP1-212ENST00000494067 IGHV3-64DA0A0J9YX35 117 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 TCRBV5S2A0A599 114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms