RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TMEM155Q4W5P6 130 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC18B1Q6NT16 456 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 PGBD2Q6P3X8 592 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 DNM1P34Q6PK57 102 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNF620Q6ZNG0 422 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 USP43Q70EL4 1123 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TEX29Q8N6K0 151 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 POP5Q969H6 163 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 APOBEC3DQ96AK3 386 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 NMNAT3Q96T66 252 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 C1QTNF5Q9BXJ0 243 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 LPAR2Q9HBW0 351 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 PNRC2Q9NPJ4 139 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TMEM106BQ9NUM4 274 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 ACTR3BQ9P1U1 418 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 CYB5R1Q9UHQ9 305 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 NPTNQ9Y639 398 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TANC2Q9HCD6 1990 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 DYSFO75923 2080 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 NBEAL1Q6ZS30 2694 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 A0A0G2JMP0 313 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 A0A0X1KG70 313 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 TCRBV5S2A0A599 114 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 F5H0A9 414 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 BHLHE40O14503 412 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 TPD52L2O43399 206 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 TIMM8AO60220 97 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR10H3O60404 316 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 VENTXO95231 258 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 FABP3P05413 133 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ACSM4P0C7M7 580 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 TNFRSF1AP19438 455 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 RRM2P31350 389 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC6A9P48067 706 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 SPIBQ01892 262 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 DBPQ10586 325 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ECH1Q13011 328 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 MEP1BQ16820 701 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 PCK2Q16822 640 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNF181Q2M3W8 571 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC27A4Q6P1M0 643 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 FAHD2BQ6P2I3 314 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 LEG1Q6P5S2 330 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ZDHHC21Q8IVQ6 265 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 C10orf67Q8IYJ2 551 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 LINC00471Q8N535 108 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR8G5Q8NG78 346 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2Z1Q8NG97 314 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR4M2Q8NGB6 313 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR5L1Q8NGL2 311 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 OR4K13Q8NH42 304 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 FANK1Q8TC84 345 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 ASB9Q96DX5 294 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 FAHD2AQ96GK7 314 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC30A2Q9BRI3 323 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 METTL17Q9H7H0 456 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 GCM1Q9NP62 436 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 MRPL22Q9NWU5 206 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 KCNG2Q9UJ96 466 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 LYVE1Q9Y5Y7 322 aa8.19□□□□□ -1.1
TMEM39A-210ENST00000490099 A8MXK9 166 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 TMEM178BH3BS89 294 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 IFNL4K9M1U5 179 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 SURF4O15260 269 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 RENP00797 406 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 ATP6V1B2P21281 511 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 TNFSF4P23510 183 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 GATA4P43694 442 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 MS4A2Q01362 244 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 PAX2Q02962 417 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 TRAP1Q12931 704 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 TRIM25Q14258 630 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 HLXQ14774 488 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC36A3Q495N2 470 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 LCN8Q6JVE9 175 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 RPL13AP3Q6NVV1 102 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 CFAP77Q6ZQR2 320 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 RASSF6Q6ZTQ3 369 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 PEG10Q86TG7 708 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 LNX2Q8N448 690 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 OR52E2Q8NGJ4 325 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 OR10S1Q8NGN2 331 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 OR13G1Q8NGZ3 307 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 CCDC124Q96CT7 223 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 MAP6Q96JE9 813 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2V2Q96R30 315 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms