RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NOVP48745 357 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TGM4P49221 684 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CASP4P49662 377 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 DNAJB13P59910 316 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PPIAP62937 165 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 DCDP81605 110 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TFAMQ00059 246 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 NAAAQ02083 359 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CSTF1Q05048 431 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PUDPQ08623 228 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RUNX3Q13761 415 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 EXOSC2Q13868 293 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 EIF2B1Q14232 305 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PIGHQ14442 188 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TRAM2Q15035 370 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CD226Q15762 336 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 KYAT1Q16773 422 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TATDN3Q17R31 274 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 KCTD19Q17RG1 926 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 C17orf58Q2M2W7 97 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SAPCD1Q5SSQ6 148 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 HACD4Q5VWC8 232 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM219BQ5XKK7 198 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF470Q6ECI4 717 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SCYL2Q6P3W7 929 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 LEG1Q6P5S2 330 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PLET1Q6UQ28 207 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 UQCC3Q6UW78 93 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 VITQ6UXI7 678 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 NPSR1Q6W5P4 371 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZCCHC23Q6ZST2 131 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TAC4Q86UU9 113 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 PSTKQ8IV42 348 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 GPD1LQ8N335 351 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 C12orf45Q8N5I9 185 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 LINC00612Q8N6U2 182 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF557Q8N988 423 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 OR2T4Q8NH00 348 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 OR52J3Q8NH60 311 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 OR6X1Q8NH79 312 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CLHC1Q8NHS4 586 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RNASE11Q8TAA1 199 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF431Q8TF32 576 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 GLYATL2Q8WU03 294 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 LINC00052Q96N35 136 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CCDC115Q96NT0 180 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 TRNT1Q96Q11 434 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 NPAS2Q99743 824 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 EBNA1BP2Q99848 306 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ZBP1Q9H171 429 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ANKRD19PQ9H560 264 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RNF122Q9H9V4 155 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 MEAF6Q9HAF1 191 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 MYOZ1Q9NP98 299 aaPredicted RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 NANSQ9NR45 359 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CD274Q9NZQ7 290 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 MYEF2Q9P2K5 600 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 P2RX2Q9UBL9 471 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 MLXQ9UH92 298 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SCP2D1Q9UJQ7 156 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SNX6Q9UNH7 406 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RNF6Q9Y252 685 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 ALG5Q9Y673 324 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 SCN11AQ9UI33 1791 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 RALGAPA1Q6GYQ0 2036 aa2.97□□□□□ -1.93
ECHDC1-217ENST00000488087 CDK5RAP2Q96SN8 1893 aa2.96□□□□□ -1.93
ECHDC1-217ENST00000488087 DOT1LQ8TEK3 1739 aa2.96□□□□□ -1.93
ECHDC1-217ENST00000488087 GLI3P10071 1580 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 SLX4Q8IY92 1834 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 IGLV3-10A0A075B6K4 115 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 MEIKINA0A087WXM9 373 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 A0A0U1RQS6 177 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 FBLL1A6NHQ2 334 aaKnown RBP2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF716A6NP11 495 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 G3V2T6 193 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 K7EQM0 130 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 FXYD1O00168 92 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 NDUFS8O00217 210 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 NME4O00746 187 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 PRMT5O14744 637 aaPredicted RBP2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 PHOX2AO14813 284 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 CASC3O15234 703 aaKnown RBP2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 MSH4O15457 936 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 CHP2O43745 196 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 CACNG3O60359 315 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 DPM1O60762 260 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 ECI2O75521 394 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 BANF1O75531 89 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 GPX5O75715 221 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 EIF3GO75821 320 aaKnown RBP eCLIP2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 LSM8O95777 96 aaKnown RBP2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 CLIC3O95833 236 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 IGSF6O95976 241 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 FGF4P08620 206 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 CSF3P09919 207 aa2.96□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF735P0CB33 412 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms