RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TEP1Q99973 2627 aaKnown RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 J3QLW9 94 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PHYHO14832 338 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 DENRO43583 198 aaKnown RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 SMPD2O60906 423 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 CTAG2O75638 210 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 NGFP01138 241 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 LCATP04180 440 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ACSM4P0C7M7 580 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 COX5BP10606 129 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF19P17023 458 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PSMB10P40306 273 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 SLC15A1P46059 708 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ETV1P50549 477 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 TPTEP56180 551 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 GRB2P62993 217 aaKnown RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ACTC1P68032 377 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ACTA1P68133 377 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ST3GAL4Q11206 333 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ECH1Q13011 328 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 C1QTNF12Q5T7M4 302 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ACBD7Q8N6N7 88 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 OR1J1Q8NGS3 322 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 OR8B4Q96RC9 309 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 KCNJ15Q99712 375 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ALG8Q9BVK2 526 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 MROQ9BYG7 248 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 ACOXLQ9NUZ1 547 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PTTG3PQ9NZH4 202 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 MRM2Q9UI43 246 aaKnown RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PSORS1C1Q9UIG5 152 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 SPEF1Q9Y4P9 236 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 PCDHGB1Q9Y5G3 927 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 FBN2P35556 2912 aa11.42□□□□□ -0.58
HDAC1-208ENST00000482310 CHD3Q12873 2000 aaKnown RBP11.42□□□□□ -0.58
HDAC1-208ENST00000482310 C5orf63A6NC05 138 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 EFCAB10A6NFE3 127 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 E7EQL1 145 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 J3QRE1 110 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 KRT8P05787 483 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 PRF1P14222 555 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 MYL12AP19105 171 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 THBS4P35443 961 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 UCP2P55851 309 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 OR12D2P58182 307 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF121P58317 390 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 RSPO1Q2MKA7 263 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 SNAI3Q3KNW1 292 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ALKBH6Q3KRA9 238 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF672Q499Z4 452 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF679Q8IYX0 411 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 IL17RDQ8NFM7 739 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 LILRB1Q8NHL6 650 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 NRGNQ92686 78 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 C4orf36Q96KX1 117 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 MNTQ99583 582 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 DOK1Q99704 481 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ISG20L2Q9H9L3 353 aaKnown RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 FGF20Q9NP95 211 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ERVK13-1Q9NX77 482 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 CISD1Q9NZ45 108 aaKnown RBP11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ERVK-18Q9QC07 812 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 CLEC2DQ9UHP7 191 aa11.41□□□□□ -0.58
HDAC1-208ENST00000482310 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 IRGMA1A4Y4 181 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 METTL15A6NJ78 407 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 H3BSH0 61 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 IGHA1P01876 353 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 NR4A1P22736 598 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 C21orf33P30042 268 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 FABP6P51161 128 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 KRTAP10-9P60411 292 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 PPP1CBP62140 327 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 HLXQ14774 488 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 ODF4Q2M2E3 257 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 OR2G6Q5TZ20 316 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 RGS7BPQ6MZT1 257 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 ARL9Q6T311 187 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 SLC25A40Q8TBP6 338 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 SYT3Q9BQG1 590 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 TMEM204Q9BSN7 226 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 OR2J1Q9GZK6 312 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 CA10Q9NS85 328 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 PLCXD1Q9NUJ7 323 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 MRPS18AQ9NVS2 196 aaKnown RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 ATPIF1Q9UII2 106 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms