RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 TNS1Q9HBL0 1735 aaKnown RBP4.46□□□□□ -1.7
SEC22A-207ENST00000481965 PARP4Q9UKK3 1724 aaKnown RBP4.46□□□□□ -1.7
SEC22A-207ENST00000481965 A0A1B0GUH1 482 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 A0A1W2PPV4 95 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 HAT1O14929 419 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 ACTL6AO96019 429 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 NR2C1P13056 603 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 NUDT1P36639 197 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 CFHR2P36980 270 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 CRISP3P54108 245 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 TMED1Q13445 227 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 OR10J6PQ8NGY7 276 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 CSPG4P5Q96PW8 444 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 CPSF1Q10570 1443 aaKnown RBP4.45□□□□□ -1.7
SEC22A-207ENST00000481965 MAPK8IP3Q9UPT6 1336 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 TOPAZ1Q8N9V7 1692 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 LMO7Q8WWI1 1683 aa4.45□□□□□ -1.7
SEC22A-207ENST00000481965 NRKQ7Z2Y5 1582 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 LOC100653049A0A140TA62 436 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF861PO60384 105 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 KRT34O76011 436 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 LSM8O95777 96 aaKnown RBP4.44□□□□□ -1.7
SEC22A-207ENST00000481965 ARG1P05089 322 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SMIM10L1P0DMW3 83 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 CALM1P0DP23 149 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 CALM2P0DP24 149 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 CALM3P0DP25 149 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 CASQ1P31415 396 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SLC26A3P40879 764 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 ETV1P50549 477 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 PSG7Q13046 419 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 RSPO1Q2MKA7 263 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-207ENST00000481965 CCNJQ5T5M9 372 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 GPR107Q5VW38 600 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 ASCL4Q6XD76 172 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 TEX43Q6ZNM6 134 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF584Q8IVC4 421 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 INO80EQ8NBZ0 244 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-207ENST00000481965 MCOLN3Q8TDD5 553 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 RAB1CQ92928 201 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SMIM10Q96HG1 83 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 DNAJC1Q96KC8 554 aaKnown RBP4.44□□□□□ -1.7
SEC22A-207ENST00000481965 C9orf72Q96LT7 481 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 WFIKKN1Q96NZ8 548 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 TSSK3Q96PN8 268 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SAR1BQ9Y6B6 198 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SLIT3O75094 1523 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 RREB1Q92766 1687 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 QRICH2Q9H0J4 1663 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 SBF2Q86WG5 1849 aa4.44□□□□□ -1.7
SEC22A-207ENST00000481965 TRPM1Q7Z4N2 1603 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 TONSLQ96HA7 1378 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 RGPD3A6NKT7 1758 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 RGPD4Q7Z3J3 1758 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ABCC6O95255 1503 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 TSPAN11A1L157 253 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 PANO1I0J062 215 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 KMOO15229 486 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 RAD51CO43502 376 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 SUPT3HO75486 399 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 IGLV1-47P01700 117 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 MBP02144 154 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 BGLAPP02818 100 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 IGHV4-34P06331 123 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 KRT16P08779 473 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 STAG3L2P0CL84 134 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 OR5H8P0DN80 308 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ELK1P19419 428 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 CSNK2A2P19784 350 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 CCNE1P24864 410 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 RFC3P40938 356 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF138P52744 262 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 LCN2P80188 198 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 XIAPP98170 497 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 SEMG2Q02383 582 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 FAM83EQ2M2I3 478 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 TTLL9Q3SXZ7 439 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 AADACL4Q5VUY2 407 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 UBE2UQ5VVX9 321 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 LYPD2Q6UXB3 125 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF493Q6ZR52 646 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 MREGQ8N565 214 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 FAM71E2Q8N5Q1 922 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 OR4A15Q8NGL6 344 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 OR51F2Q8NH61 342 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ACTRT1Q8TDG2 376 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 PIH1D2Q8WWB5 315 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 APH1AQ96BI3 265 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 FOXC2Q99958 501 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 DEC1Q9P2X7 70 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF629Q9UEG4 869 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 ZNF225Q9UK10 706 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 PRG3Q9Y2Y8 225 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 EDC4Q6P2E9 1401 aaKnown RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 NUP188Q5SRE5 1749 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 NFASCO94856 1347 aa4.43□□□□□ -1.7
SEC22A-207ENST00000481965 COL2A1P02458 1487 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-207ENST00000481965 AKAP12Q02952 1782 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms