RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	RAB39A	Q14964	217 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	RCN1	Q15293	331 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR8B8	Q15620	311 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MST1L	Q2TV78	715 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC35F1	Q5T1Q4	408 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF684	Q5T5D7	378 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	C9orf135	Q5VTT2	229 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLBD1	Q6P4A8	553 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	FDX2	Q6P4F2	183 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	B3GLCT	Q6Y288	498 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	PRSS45	Q7RTY3	260 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MYPOP	Q86VE0	399 aa	Predicted RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MEX3D	Q86XN8	651 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	CPO	Q8IVL8	374 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SYS1	Q8N2H4	156 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	LRRC18	Q8N456	261 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SPERT	Q8NA61	448 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	ICA1L	Q8NDH6	482 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR10S1	Q8NGN2	331 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	FGFBP3	Q8TAT2	258 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SYNPR	Q8TBG9	265 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	NSMAF	Q92636	917 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	HAVCR1	Q96D42	359 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLAMF6	Q96DU3	332 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF799	Q96GE5	643 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MAP6	Q96JE9	813 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	TSSK2	Q96PF2	358 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	IL4I1	Q96RQ9	567 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	ABHD6	Q9BV23	337 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	REPIN1	Q9BWE0	567 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	HCAR1	Q9BXC0	346 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRO	Q9BYG7	248 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	RAB1B	Q9H0U4	201 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SEMA6A	Q9H2E6	1030 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	ADGRL4	Q9HBW9	690 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	SRA1	Q9HD15	236 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	DLL4	Q9NR61	685 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLCXD1	Q9NUJ7	323 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	FAM118A	Q9NWS6	357 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	IMPAD1	Q9NX62	359 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	CNOT2	Q9NZN8	540 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPL15	Q9P015	296 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	NUFIP1	Q9UHK0	495 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	POU2F3	Q9UKI9	436 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	EXOG	Q9Y2C4	368 aa	Known RBP	4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	POLR1D	Q9Y2S0	133 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	NAV3	Q8IVL0	2385 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	DYSF	O75923	2080 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	CSPG4	Q6UVK1	2322 aa		4.37	□□□□□ -1.71
HDAC6-223	ENST00000480525	CR1	P17927	2039 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLSCR5	A0PG75	271 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	C5orf49	A4QMS7	147 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	C17orf100	A8MU93	164 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF593	O00488	134 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TLX2	O43763	284 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	RRP9	O43818	475 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	GMDS	O60547	372 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPS14	O60783	128 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SEC14L2	O76054	403 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ALX3	O95076	343 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	FADS2	O95864	444 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLAU	P00749	431 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	HLA-DQA2	P01906	255 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ISG15	P05161	165 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SCG5	P05408	212 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CELA3B	P08861	270 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF12	P17014	697 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ACHE	P22303	614 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCL1	P22362	96 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	APEX1	P27695	318 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	DCK	P27707	260 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	POU1F1	P28069	291 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	GCH1	P30793	250 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	THBS4	P35443	961 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CFHR2	P36980	270 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	MTNR1A	P48039	350 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	FABP6	P51161	128 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCR9	P51686	369 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	KRTAP10-9	P60411	292 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	PPP1CB	P62140	327 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ADARB1	P78563	741 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	PIGF	Q07326	219 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC3A1	Q07837	685 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SPOCK1	Q08629	439 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	MALL	Q13021	153 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CDK5R2	Q13319	367 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	APOF	Q13790	326 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TRIP10	Q15642	601 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CDON	Q4KMG0	1287 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCDC58	Q4VC31	144 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	KLHL22	Q53GT1	634 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF691	Q5VV52	312 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF774	Q6NX45	483 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CFAP77	Q6ZQR2	320 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLEKHG7	Q6ZR37	379 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms