RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TNXAQ16473 311 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 RGS21Q2M5E4 152 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF549Q6P9A3 640 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 C3P1Q6ZMU1 363 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 C16orf82Q7Z2V1 217 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 PTAR1Q7Z6K3 402 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF546Q86UE3 836 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 LRRC6Q86X45 466 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 SPAG16Q8N0X2 631 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 BEST4Q8NFU0 473 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 UBA3Q8TBC4 463 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 NEIL2Q969S2 332 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 C11orf52Q96A22 123 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 OR8B4Q96RC9 309 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF251Q9BRH9 671 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF747Q9BV97 191 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 SRRQ9GZT4 340 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 BOLA2Q9H3K6 86 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 LIME1Q9H400 295 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ZDHHC4Q9NPG8 344 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 NECAP2Q9NVZ3 263 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 TAAR2Q9P1P5 351 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 FBXO7Q9Y3I1 522 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 CSNK1G3Q9Y6M4 447 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-215ENST00000476664 KIF26BQ2KJY2 2108 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 DENND4CQ5VZ89 1909 aa5.6□□□□□ -1.51
LRCH3-215ENST00000476664 IGHV4-4A0A075B6R2 117 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 IGHV3-20A0A0C4DH32 117 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 A0A1B0GTI1 187 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 PLEKHA8P1O95397 391 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 FGGP02679 453 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 H2AFZP0C0S5 128 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SYT1P21579 422 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 IGFBP5P24593 272 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 AQP2P41181 271 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ARPP19P56211 112 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ATP6V0D1P61421 351 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 CHRNB3Q05901 458 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 PUDPQ08623 228 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ELAVL2Q12926 359 aaKnown RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 TRMT5Q32P41 509 aaKnown RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 FAM219BQ5XKK7 198 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 FAM151BQ6UXP7 276 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 PLA2G4DQ86XP0 818 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 PDIK1LQ8N165 341 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SVOPLQ8N434 492 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 NRACQ8N912 160 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ZNRF1Q8ND25 227 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 NOXO1Q8NFA2 376 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 OR52B6Q8NGF0 335 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 TFGQ92734 400 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 MS4A14Q96JA4 679 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SERPINB11Q96P15 392 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SORT1Q99523 831 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 FAIM2Q9BWQ8 316 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SCAND2PQ9GZW5 306 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 C1orf198Q9H425 327 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ARMC7Q9H6L4 198 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 BEX1Q9HBH7 125 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 ZNF71Q9NQZ8 489 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 PAK1IP1Q9NWT1 392 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-215ENST00000476664 CLEC2DQ9UHP7 191 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 LGALS13Q9UHV8 139 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 MGAT4AQ9UM21 535 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 HES2Q9Y543 173 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 UBIAD1Q9Y5Z9 338 aa5.59□□□□□ -1.51
LRCH3-215ENST00000476664 SHANK1Q9Y566 2161 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 FAM231BA6NCW3 169 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 MKRN2OSH3BPM6 223 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ZW10O43264 779 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 PAX4O43316 350 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 SULT1B1O43704 296 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 RBMXL2O75526 392 aaKnown RBP5.58□□□□□ -1.52
LRCH3-215ENST00000476664 SC5DO75845 299 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ATP5HO75947 161 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 CLIC3O95833 236 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 TOMM40O96008 361 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 CCNE2O96020 404 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ZNF26P17031 533 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-215ENST00000476664 PGAM1P18669 254 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 HTR1FP30939 366 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ARR3P36575 388 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ACVR1BP36896 505 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 PTGDSP41222 190 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 FOXG1P55316 489 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-215ENST00000476664 TSPAN5P62079 268 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 VSNL1P62760 191 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 MTF1Q14872 753 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 PDGFRLQ15198 375 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 GABRA6Q16445 453 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 RNLSQ5VYX0 342 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 ADNP2Q6IQ32 1131 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 FOXL2NBQ6ZUU3 175 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 DCXRQ7Z4W1 244 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 CRLF3Q8IUI8 442 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 SLC16A11Q8NCK7 471 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 FAM76AQ8TAV0 307 aa5.58□□□□□ -1.52
LRCH3-215ENST00000476664 CXorf40AQ8TE69 158 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms