RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RPL5P46777 297 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 TGM4P49221 684 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CCR9P51686 369 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PRKXP51817 358 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 NR1H2P55055 460 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 WNT4P56705 351 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 GALK2Q01415 458 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 SCRN3Q0VDG4 424 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ECH1Q13011 328 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 BLMHQ13867 455 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 SNTB1Q13884 538 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 TBCEQ15813 527 aaPredicted RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 SSX1Q16384 188 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 GSG1Q2KHT4 349 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 C3orf36Q3SXR2 165 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CCDC58Q4VC31 144 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ARMCX4Q5H9R4 360 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 DMKNQ6E0U4 476 aaPredicted RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 RPL22L1Q6P5R6 122 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 CLEC18BQ6UXF7 455 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 UNQ9370/PRO34162Q6UXP9 181 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 KRT77Q7Z794 578 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MDP1Q86V88 176 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ZGRF1Q86YA3 2104 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MED12LQ86YW9 2145 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 KLBQ86Z14 1044 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 ALDH16A1Q8IZ83 802 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PRSS35Q8N3Z0 413 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 KLHL36Q8N4N3 616 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 ZNF808Q8N4W9 903 aaPredicted RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 CLEC18CQ8NCF0 446 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 OR2G2Q8NGZ5 317 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 LINC01560Q8TB33 94 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 CA5BP1Q8WTZ4 195 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 GHSRQ92847 366 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 RNASE6Q93091 150 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 MUL1Q969V5 352 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 OPALINQ96PE5 141 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 COQ7Q99807 217 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MND1Q9BWT6 205 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MROQ9BYG7 248 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 MRPS26Q9BYN8 205 aaKnown RBP5.16□□□□□ -1.58
USP39-213ENST00000467885 TTTY10Q9BZA0 68 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 OBP2BQ9NPH6 170 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 G6PC2Q9NQR9 355 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 PLEK2Q9NYT0 353 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 SLC22A13Q9Y226 551 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 STARD10Q9Y365 291 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 LRP12Q9Y561 859 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 SNX5Q9Y5X3 404 aa5.16□□□□□ -1.58
USP39-213ENST00000467885 FREM1Q5H8C1 2179 aa5.15□□□□□ -1.58
USP39-213ENST00000467885 SPENQ96T58 3664 aaKnown RBP5.15□□□□□ -1.58
USP39-213ENST00000467885 COL6A6A6NMZ7 2263 aa5.15□□□□□ -1.58
USP39-213ENST00000467885 IGHV1-18A0A0C4DH31 117 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 A0A1B0GTI1 187 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 TMEM269A0A1B0GVZ9 245 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 A6NHS1 94 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 F5H5K5 113 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 RPP14O95059 124 aaKnown RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 ZFPL1O95159 310 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 UBL3O95164 117 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CLDN14O95500 239 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 NGFP01138 241 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 IGLV3-1P01715 115 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 KRT8P05787 483 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CELA3BP08861 270 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CPEP16870 476 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CELP19835 753 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 IL32P24001 234 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 STOMP27105 288 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CCKARP32238 428 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 CRYBB2P43320 205 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 KIR3DL2P43630 455 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 RGS6P49758 472 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 ASCL1P50553 236 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 RIDAP52758 137 aaKnown RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 GBX2P52951 348 aaPredicted RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 UBE2NP61088 152 aaKnown RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 RPS11P62280 158 aaKnown RBP eCLIP5.15□□□□□ -1.59
USP39-213ENST00000467885 BDH1Q02338 343 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 HGFACQ04756 655 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 PLP2Q04941 152 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 MLLT11Q13015 90 aaPredicted RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 ALKBH1Q13686 389 aaKnown RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 RAB35Q15286 201 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 MED22Q15528 200 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 NEDD8Q15843 81 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 TMEM53Q6P2H8 277 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 TMEM91Q6ZNR0 172 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 Q6ZSR3 168 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 MYPOPQ86VE0 399 aaPredicted RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 CATSPERDQ86XM0 798 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 PHC2Q8IXK0 858 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 ELMOD2Q8IZ81 293 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 RDH10Q8IZV5 341 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 PAQR4Q8N4S7 273 aaPredicted RBP5.15□□□□□ -1.59
USP39-213ENST00000467885 YIPF7Q8N8F6 280 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 PLPP7Q8NBV4 271 aa5.15□□□□□ -1.59
USP39-213ENST00000467885 ACBD4Q8NC06 268 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms