RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 EGR3Q06889 387 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 ARMCX4Q5H9R4 360 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 LYPD4Q6UWN0 246 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 PLEKHG7Q6ZR37 379 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 Q6ZT83 130 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 FAM220AQ7Z4H9 259 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
SF3A3-203ENST00000461869 KCTD20Q7Z5Y7 419 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 OTOSQ8NHW6 89 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 TMIGD2Q96BF3 282 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 OR5M11Q96RB7 305 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF649Q9BS31 505 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
SF3A3-203ENST00000461869 PRSS50Q9UI38 385 aa13.49□□□□□ -0.25
SF3A3-203ENST00000461869 A0A096LNT2 108 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 IGKV1D-43A0A0B4J1Z2 117 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 CCRL2O00421 344 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF593O00488 134 aaPredicted RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 ABCD4O14678 606 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 KRT33AO76009 404 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 KRT8P05787 483 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 SPARCP09486 303 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 TACSTD2P09758 323 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 DSCR9P59020 149 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 DBPQ10586 325 aaPredicted RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 KCNMB1Q16558 191 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 PCK2Q16822 640 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 TIMM50Q3ZCQ8 353 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 OR2G6Q5TZ20 316 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 CLEC2AQ6UVW9 174 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 CLVS1Q8IUQ0 354 aaPredicted RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 RAB2BQ8WUD1 216 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 SPRYD4Q8WW59 207 aaPredicted RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 UFD1Q92890 307 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 APH1AQ96BI3 265 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 DGCR14Q96DF8 476 aaKnown RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 CACNG6Q9BXT2 260 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 BEX2Q9BXY8 128 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 RBM38Q9H0Z9 239 aaKnown RBP13.48□□□□□ -0.25
SF3A3-203ENST00000461869 NELFAQ9H3P2 528 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 SEC61A2Q9H9S3 476 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 POLR1DQ9Y2S0 133 aa13.48□□□□□ -0.25
SF3A3-203ENST00000461869 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 SULT1C4O75897 302 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ALOX5APP20292 161 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 NPR2P20594 1047 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 MSR1P21757 451 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 OR3A2P47893 321 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 TMBIM6P55061 237 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 LSM6P62312 80 aaKnown RBP13.47□□□□□ -0.25
SF3A3-203ENST00000461869 KRTAP24-1Q3LI83 254 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 TIMM23BQ5SRD1 257 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 GPR107Q5VW38 600 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 P2RY8Q86VZ1 359 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF100Q8IYN0 542 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF485Q8NCK3 441 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 GATAD2BQ8WXI9 593 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF775Q96BV0 537 aaPredicted RBP13.47□□□□□ -0.25
SF3A3-203ENST00000461869 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 C4orf36Q96KX1 117 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 OPALINQ96PE5 141 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ALKBH3Q96Q83 286 aaPredicted RBP13.47□□□□□ -0.25
SF3A3-203ENST00000461869 POLE4Q9NR33 117 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 BABAM2Q9NXR7 383 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
SF3A3-203ENST00000461869 COPS3Q9UNS2 423 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 CEPT1Q9Y6K0 416 aa13.47□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF587BE7ETH6 402 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 J3QLW9 94 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 GPANK1O95872 356 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 CD36P16671 472 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 CPEP16870 476 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 ZNF19P17023 458 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 IGHV1-2P23083 117 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 RGS6P49758 472 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 GBX2P52951 348 aaPredicted RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 MRPS34P82930 218 aaKnown RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 LOXL1Q08397 574 aaPredicted RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 RAB35Q15286 201 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 TSTQ16762 297 aaKnown RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 NRN1LQ496H8 165 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 VASH1Q7L8A9 365 aaPredicted RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 SSX8Q7RTT4 187 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 ANKRD13BQ86YJ7 626 aa13.46□□□□□ -0.25
SF3A3-203ENST00000461869 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
SF3A3-203ENST00000461869 OR2AJ1Q8NGZ0 328 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms