RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 C9orf16Q9BUW7 83 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 HCAR1Q9BXC0 346 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 C1QTNF5Q9BXJ0 243 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 OR2J1Q9GZK6 312 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 OR51B6Q9H340 312 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 TOR3AQ9H497 397 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 WDR76Q9H967 626 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 NKIRAS2Q9NYR9 191 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 MYEF2Q9P2K5 600 aaKnown RBP10.16□□□□□ -0.78
VPS52-213ENST00000461743 DUSP13Q9UII6 198 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 DYSFO75923 2080 aa10.16□□□□□ -0.78
VPS52-213ENST00000461743 LOC390937A0A1W2PQ73 354 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 PLSCR5A0PG75 271 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 SAC3D1A6NKF1 404 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 C17orf100A8MU93 164 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 M0R135 149 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 APOC1P02654 83 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ADH4P08319 380 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ADRA2AP08913 450 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ACSM4P0C7M7 580 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 KITLGP21583 273 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 SLC15A1P46059 708 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 TPTEP56180 551 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 GGTLC2Q14390 218 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 CNPY1Q3B7I2 92 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 OTPQ5XKR4 325 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 DRAM2Q6UX65 266 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 FBXW12Q6X9E4 464 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 COLCA1Q6ZS62 124 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 DCXRQ7Z4W1 244 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 LRP11Q86VZ4 500 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ERI1Q8IV48 349 aaKnown RBP10.15□□□□□ -0.78
VPS52-213ENST00000461743 CPOQ8IVL8 374 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 GID4Q8IVV7 300 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 TIGD4Q8IY51 512 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 OR6N2Q8NGY6 317 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ST7LQ8TDW4 575 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 C10orf105Q8TEF2 133 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ZNRF4Q8WWF5 429 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 NRG4Q8WWG1 115 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 FAM168AQ92567 244 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 PTP4A1Q93096 173 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 OTULINQ96BN8 352 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 SLAMF6Q96DU3 332 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ZNF799Q96GE5 643 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 DIRC2Q96SL1 478 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 PIMREGQ9BSJ6 248 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 OPA3Q9H6K4 179 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 MED20Q9H944 212 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 TVP23BQ9NYZ1 205 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 NDUFA13Q9P0J0 144 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 FZR1Q9UM11 496 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 GRIP1Q9Y3R0 1128 aa10.15□□□□□ -0.78
VPS52-213ENST00000461743 ABCA2Q9BZC7 2435 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SLC22A31A6NKX4 558 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 ZNF593O00488 134 aaPredicted RBP10.14□□□□□ -0.79
VPS52-213ENST00000461743 EI24O14681 340 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 MITFO75030 526 aaPredicted RBP10.14□□□□□ -0.79
VPS52-213ENST00000461743 CLPTM1O96005 669 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 NGFP01138 241 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 LYNP07948 512 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 DBHP09172 617 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 INHBBP09529 407 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 RAC2P15153 192 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SELEP16581 610 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 RANBP1P43487 201 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 CDC42P60953 191 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 RPS7P62081 194 aaKnown RBP10.14□□□□□ -0.79
VPS52-213ENST00000461743 LSAMPQ13449 338 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 TNK1Q13470 666 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SPATA46Q5T0L3 261 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 NXNL2Q5VZ03 156 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 TMEM236Q5W0B7 351 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 DPY19L4Q7Z388 723 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 ZNF525Q8N782 197 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 ZNF540Q8NDQ6 660 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 OR10S1Q8NGN2 331 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 OTOSQ8NHW6 89 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 TMEM163Q8TC26 289 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 RNF133Q8WVZ7 376 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SLC7A6Q92536 515 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 KCNJ15Q99712 375 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 COPS4Q9BT78 406 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 OR51V1Q9H2C8 321 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 SP140LQ9H930 580 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 C8orf4Q9NR00 106 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 ZDHHC8Q9ULC8 765 aa10.14□□□□□ -0.79
VPS52-213ENST00000461743 TRIM64A6NGJ6 449 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 TRIM64BA6NI03 449 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 H7C1Q1 480 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 PRKYO43930 277 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 TIMM8AO60220 97 aaPredicted RBP10.13□□□□□ -0.79
VPS52-213ENST00000461743 CD55P08174 381 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 PSKH1P11801 424 aa10.13□□□□□ -0.79
VPS52-213ENST00000461743 DAOP14920 347 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms