RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MPGP29372 298 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF133P52736 654 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 CLDN6P56747 220 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 SPOCK1Q08629 439 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 MYBPHQ13203 477 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF345Q14585 488 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 FAM189A2Q15884 450 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 DCAF12L2Q5VW00 463 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 Q6ZSR3 168 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF627Q7L945 461 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC51BQ86UW2 128 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC25A42Q86VD7 318 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 LINC00346Q8IVM7 164 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 UEVLDQ8IX04 471 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 KDM8Q8N371 416 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 BPIFB2Q8N4F0 458 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 JAGN1Q8N5M9 183 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 OR5D14Q8NGL3 314 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 OR1J2Q8NGS2 313 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 DVL3Q92997 716 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 DNAJA3Q96EY1 480 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 WDR89Q96FK6 387 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 C5orf34Q96MH7 638 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 OXGR1Q96P68 337 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 SPSB2Q99619 263 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 TINAGL1Q9GZM7 467 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 CHST6Q9GZX3 395 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 TTYH1Q9H313 450 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 MED29Q9NX70 200 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 MYOTQ9UBF9 498 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 C19orf25Q9UFG5 118 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 RARRES3Q9UL19 164 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 HDGFL3Q9Y3E1 203 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 U3KQA8 63 aa11.13□□□□□ -0.63
ECHDC1-209ENST00000454591 ARID1BQ8NFD5 2236 aaPredicted RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 ABCA7Q8IZY2 2146 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 ALPK2Q86TB3 2170 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 A0A0D9SG52 128 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 CEACAM18A8MTB9 384 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 H3BSH0 61 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 IGHG1P01857 330 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 CHRM2P08172 466 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 ZP3P21754 424 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 ZBTB25P24278 435 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 EPHA8P29322 1005 aaPredicted RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 EIF1P41567 113 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 UNC119Q13432 240 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 GK2Q14410 553 aaPredicted RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 NR0B2Q15466 257 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 MOGAT2Q3SYC2 334 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 C16orf47Q6ZP98 133 aaPredicted RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 OVCH2Q7RTZ1 564 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 OR5M9Q8NGP3 310 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 FGGYQ96C11 551 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC6A7Q99884 636 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC7A5P2Q9GIP4 190 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 WDR54Q9H977 334 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 LHFPL6Q9Y693 200 aa11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 PHF3Q92576 2039 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-209ENST00000454591 A0A087WZY1 265 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 LOC102723996A0A087X1L8 192 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 LOC101059948A0A1B0GTJ6 334 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 A8MXK9 166 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 SYT7O43581 403 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 LMX1BO60663 402 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 SCRG1O75711 98 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 SIX6O95475 246 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 NR2C1P13056 603 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF250P15622 560 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 MGMTP16455 207 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 RAB3AP20336 220 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 CD96P40200 585 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 UBE2MP61081 183 aaKnown RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 DHRS2Q13268 280 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 RNASE10Q5GAN6 216 aaKnown RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 MRPL14Q6P1L8 145 aaKnown RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 FOXL2NBQ6ZUU3 175 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 ADAT3Q96EY9 351 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 NARFLQ9H6Q4 476 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.11□□□□□ -0.635e-12■■■■■ 43.9
ECHDC1-209ENST00000454591 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 KLRF1Q9NZS2 232 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms