RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 KDM8Q8N371 416 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 CDRT4Q8N9R6 151 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 ICA1LQ8NDH6 482 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 C19orf18Q8NEA5 215 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 KLHL30-AS1Q8NEE0 82 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 TMEM234Q8WY98 164 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 RNF183Q96D59 192 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 OR2M2Q96R28 347 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF382Q96SR6 550 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 ATF6BQ99941 703 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 FAIM2Q9BWQ8 316 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 HOXD1Q9GZZ0 328 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 PFDN4Q9NQP4 134 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 DDX18Q9NVP1 670 aaKnown RBP4□□□□□ -1.77
SBDSP1-204ENST00000453858 THAP1Q9NVV9 213 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 ADPRHL2Q9NX46 363 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 AHSPQ9NZD4 102 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 RNF11Q9Y3C5 154 aa4□□□□□ -1.77
SBDSP1-204ENST00000453858 SPIN1Q9Y657 262 aaPredicted RBP4□□□□□ -1.77
SBDSP1-204ENST00000453858 NPIPB13A6NJU9 1138 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 NPIPB5A8MRT5 1133 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 FAM90A22PA8MWA6 464 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 NPIPB4C9JG80 1138 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 MS4A18H0YCH9 400 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 H3BNH8 94 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 H3BSA7 217 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 STX16-NPEPL1H3BU86 382 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 DVL1O14640 695 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 STX16O14662 325 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 UGDHO60701 494 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 IFNB1P01574 187 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 IL3P08700 152 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 UBL4AP11441 157 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 PRPS2P11908 318 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 TSPAN8P19075 237 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CCNA2P20248 432 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CTNNA1P35221 906 aaKnown RBP3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 MVDP53602 400 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CLDN17P56750 224 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 ZBED6P86452 979 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CDK16Q00536 496 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF91Q05481 1191 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CRYMQ14894 314 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 VPS26BQ4G0F5 336 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 XKR7Q5GH72 579 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 LDLRAD2Q5SZI1 272 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 PXDC1Q5TGL8 231 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 NOXRED1Q6NXP6 359 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 FRA10AC1Q70Z53 315 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 ANKRD13BQ86YJ7 626 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 FAM185AQ8N0U4 392 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 FAM71CQ8NEG0 241 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CADM1Q9BY67 442 aaKnown RBP3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 DERL2Q9GZP9 239 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 DCLRE1BQ9H816 532 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 CDH20Q9HBT6 801 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 EQTNQ9NQ60 294 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 MAN2C1Q9NTJ4 1040 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 GIN1Q9NXP7 522 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 SENP1Q9P0U3 644 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 ONECUT1Q9UBC0 465 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 OSGIN1Q9UJX0 560 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 PACSIN2Q9UNF0 486 aaPredicted RBP3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 ATP6V1DQ9Y5K8 247 aa3.99□□□□□ -1.77
SBDSP1-204ENST00000453858 LOC100509620A0A075B734 347 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 TMED7-TICAM2A0A0A6YYA0 188 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 A0A1B0GWJ7 208 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 PRSS47A8MTI9 375 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 C12orf77C9JDV5 145 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 G3V2L1 256 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 M0R3G1 203 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 SURF4O15260 269 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 GPIP06744 558 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 MMP7P09237 267 aaPredicted RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 MAGEA6P43360 314 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 CCR4P51679 360 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 DYNLT3P51808 116 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 NCBP2P52298 156 aaKnown RBP eCLIP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 PHEXP78562 749 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF45Q02386 682 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 OR7A5Q15622 319 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 TWIST1Q15672 202 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 CLEC12AQ5QGZ9 265 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 C10orf25Q5T742 122 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 TMEM268Q5VZI3 342 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 NCR3LG1Q68D85 454 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF770Q6IQ21 691 aaPredicted RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 EMBQ6PCB8 327 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 RFPL4BQ6ZWI9 263 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 PIGWQ7Z7B1 504 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 ZDHHC23Q8IYP9 409 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 CNPY4Q8N129 248 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 LYPD1Q8N2G4 141 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 MMGT1Q8N4V1 131 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 PHLDA1Q8WV24 401 aaPredicted RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 RPL36ALQ969Q0 106 aaKnown RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 POM121L2Q96KW2 1035 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 LRR1Q96L50 414 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 NAP1L5Q96NT1 182 aaPredicted RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF607Q96SK3 696 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms