RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZDHHC22Q8N966 263 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 BHLHE23Q8NDY6 225 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 SLC26A10Q8NG04 563 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 OR4K13Q8NH42 304 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 ZNF420Q8TAQ5 688 aaPredicted RBP17.68■□□□□ 0.42
VSX1-206ENST00000444511 DVL3Q92997 716 aaPredicted RBP17.68■□□□□ 0.42
VSX1-206ENST00000444511 CDADC1Q9BWV3 514 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 HCAR1Q9BXC0 346 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 PLA2G12AQ9BZM1 189 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 WDR76Q9H967 626 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 RPRD1BQ9NQG5 326 aaKnown RBP17.68■□□□□ 0.42
VSX1-206ENST00000444511 NUP50Q9UKX7 468 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 INSIG2Q9Y5U4 225 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 DYSFO75923 2080 aa17.68■□□□□ 0.42
VSX1-206ENST00000444511 WNK2Q9Y3S1 2297 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 CEACAM18A8MTB9 384 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 IQCF6A8MYZ5 107 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 H0YL77 283 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 SEMG1P04279 462 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 SELEP16581 610 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 IFNGR2P38484 337 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 UBA52P62987 128 aaKnown RBP17.67■□□□□ 0.42
VSX1-206ENST00000444511 LINC00346Q8IVM7 164 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 OR2AJ1Q8NGZ0 328 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 ZMYND19Q96E35 227 aaPredicted RBP17.67■□□□□ 0.42
VSX1-206ENST00000444511 NSMCE2Q96MF7 247 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 PITX2Q99697 317 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 SLC30A2Q9BRI3 323 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
VSX1-206ENST00000444511 TMCC3Q9ULS5 477 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 LRCH1Q9Y2L9 728 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 PPIAL4AQ9Y536 164 aa17.67■□□□□ 0.42
VSX1-206ENST00000444511 IGHV3-64DA0A0J9YX35 117 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 LRRC30A6NM36 301 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 F5H5P2 479 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 ZNF205O95201 554 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 CYB5R3P00387 301 aaPredicted RBP17.66■□□□□ 0.42
VSX1-206ENST00000444511 HLA-DQA2P01906 255 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 FABP3P05413 133 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 HSD17B1P14061 328 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 DBPQ10586 325 aaPredicted RBP17.66■□□□□ 0.42
VSX1-206ENST00000444511 ECH1Q13011 328 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 SAMD4BQ5PRF9 694 aaKnown RBP17.66■□□□□ 0.42
VSX1-206ENST00000444511 SLC18B1Q6NT16 456 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 CFAP77Q6ZQR2 320 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 SIGLECL1Q8N7X8 197 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 TMEM100Q9NV29 134 aa17.66■□□□□ 0.42
VSX1-206ENST00000444511 F5H5K5 113 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 MLNRO43193 412 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 IDH3BO43837 385 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 SNX3O60493 162 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 WNT2P09544 360 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 RPS2P15880 293 aaKnown RBP17.65■□□□□ 0.42
VSX1-206ENST00000444511 CPT2P23786 658 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 RRM2P31350 389 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 MSX2P35548 267 aaPredicted RBP17.65■□□□□ 0.42
VSX1-206ENST00000444511 RSPO1Q2MKA7 263 aaPredicted RBP17.65■□□□□ 0.42
VSX1-206ENST00000444511 COLCA1Q6ZS62 124 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 CPLX4Q7Z7G2 160 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 ZBTB46Q86UZ6 589 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 MOGAT3Q86VF5 341 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 PGAM4Q8N0Y7 254 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 SDR9C7Q8NEX9 313 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 ATF6BQ99941 703 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 SSBP3Q9BWW4 388 aaPredicted RBP17.65■□□□□ 0.42
VSX1-206ENST00000444511 C1QTNF5Q9BXJ0 243 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 FN3KQ9H479 309 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 TMEM165Q9HC07 324 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 ZNF69Q9UC07 566 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 ARHGAP32A7KAX9 2087 aa17.65■□□□□ 0.42
VSX1-206ENST00000444511 OR6C68A6NDL8 312 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 ARPC2O15144 300 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 LCATP04180 440 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 ACSM4P0C7M7 580 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 GSSP48637 474 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 MALLQ13021 153 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 KRTAP27-1Q3LI81 207 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 KLF17Q5JT82 389 aaPredicted RBP17.64■□□□□ 0.41
VSX1-206ENST00000444511 C1orf87Q8N0U7 546 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 OR52E2Q8NGJ4 325 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 GNPDA2Q8TDQ7 276 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 CDRT15Q96T59 188 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 MIOXQ9UGB7 285 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 CYB5R1Q9UHQ9 305 aa17.64■□□□□ 0.41
VSX1-206ENST00000444511 TENM1Q9UKZ4 2725 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 HLA-DPB1P04440 258 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 IRF2P14316 349 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 PRSS12P56730 875 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 GNB2P62879 340 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 TRAP1Q12931 704 aaKnown RBP17.63■□□□□ 0.41
VSX1-206ENST00000444511 TSPAN31Q12999 210 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 GK2Q14410 553 aaPredicted RBP17.63■□□□□ 0.41
VSX1-206ENST00000444511 ZNF181Q2M3W8 571 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 AWAT1Q58HT5 328 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 SLC35F1Q5T1Q4 408 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 BTNL3Q6UXE8 466 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 ZNF620Q6ZNG0 422 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 DOK3Q7L591 496 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 KLBQ86Z14 1044 aa17.63■□□□□ 0.41
VSX1-206ENST00000444511 PLEKHA8Q96JA3 519 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms