RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 FBXW12Q6X9E4 464 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 OR5L1Q8NGL2 311 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 OR10S1Q8NGN2 331 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 PTP4A1Q93096 173 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 C1QTNF5Q9BXJ0 243 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 WDR76Q9H967 626 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 ZNF556Q9HAH1 456 aa17.26■□□□□ 0.35
GTF3A-202ENST00000419181 PPIHO43447 177 aaKnown RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 DEAF1O75398 565 aaPredicted RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 TIPRLO75663 272 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 OSMP13725 252 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 CDK5R2Q13319 367 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 HLXQ14774 488 aaPredicted RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 LINC01590Q5TEZ4 76 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 FAM166AQ6J272 317 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 SLC27A4Q6P1M0 643 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 SHQ1Q6PI26 577 aaKnown RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 Q6ZR03 302 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 ZNF511Q8NB15 262 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 UTP4Q969X6 686 aaKnown RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 NRBF2Q96F24 287 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 ELMOD3Q96FG2 381 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 C1orf159Q96HA4 380 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 HCAR1Q9BXC0 346 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 DDX28Q9NUL7 540 aaKnown RBP17.25■□□□□ 0.35
GTF3A-202ENST00000419181 PTTG3PQ9NZH4 202 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 CACNG2Q9Y698 323 aa17.25■□□□□ 0.35
GTF3A-202ENST00000419181 FAM183AA6NL82 134 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 KIAA1324LA8MWY0 1029 aaPredicted RBP17.24■□□□□ 0.35
GTF3A-202ENST00000419181 F5H5K5 113 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 WNT9BO14905 357 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 LMX1BO60663 402 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 POU1F1P28069 291 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 ENTPD1P49961 510 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 BLVRAP53004 296 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 CCNIQ14094 377 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 GINS1Q14691 196 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 HFEQ30201 348 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 SPRNQ5BIV9 151 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 ACSM5Q6NUN0 579 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 OR6K6Q8NGW6 343 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 CLDND2Q8NHS1 167 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 EGLN1Q9GZT9 426 aa17.24■□□□□ 0.35
GTF3A-202ENST00000419181 TGFAP01135 160 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 SPARCP09486 303 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 IGFBP5P24593 272 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 OTX1P32242 354 aaPredicted RBP17.23■□□□□ 0.35
GTF3A-202ENST00000419181 CDH15P55291 814 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 TNFAIP6P98066 277 aaPredicted RBP17.23■□□□□ 0.35
GTF3A-202ENST00000419181 CDK5Q00535 292 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 TEX30Q5JUR7 227 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 C1orf146Q5VVC0 180 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 DCXRQ7Z4W1 244 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 ATG16L2Q8NAA4 619 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 NARFLQ9H6Q4 476 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 MED20Q9H944 212 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 CDC42EP3Q9UKI2 254 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 KCNS2Q9ULS6 477 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 SVEP1Q4LDE5 3571 aa17.23■□□□□ 0.35
GTF3A-202ENST00000419181 CLDN25C9JDP6 229 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 M0R135 149 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 ZNF593O00488 134 aaPredicted RBP17.22■□□□□ 0.35
GTF3A-202ENST00000419181 TPTEP56180 551 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 ATP6AP1Q15904 470 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 CHRFAM7AQ494W8 412 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 OR2T2Q6IF00 324 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 FAHD1Q6P587 224 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 NAA40Q86UY6 237 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 LINC01356Q8N9X3 169 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 ST7LQ8TDW4 575 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 SPTSSAQ969W0 71 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 DUS3LQ96G46 650 aaKnown RBP17.22■□□□□ 0.35
GTF3A-202ENST00000419181 ZNF799Q96GE5 643 aa17.22■□□□□ 0.35
GTF3A-202ENST00000419181 SURF4O15260 269 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 LCATP04180 440 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 PAICSP22234 425 aaKnown RBP17.21■□□□□ 0.35
GTF3A-202ENST00000419181 AVPI1Q5T686 147 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 OR5AS1Q8N127 324 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 OR8G5Q8NG78 346 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 OR2Z1Q8NG97 314 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 CCL17Q92583 94 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 SLAMF6Q96DU3 332 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 MARCH7Q9H992 704 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 SLC25A19Q9HC21 320 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 KIF17Q9P2E2 1029 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 WIPI2Q9Y4P8 454 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 ATRQ13535 2644 aa17.21■□□□□ 0.35
GTF3A-202ENST00000419181 IQCF6A8MYZ5 107 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 GLCEO94923 617 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 HMGN1P05114 100 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 TNFSF4P23510 183 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 LMO4P61968 165 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 MVKQ03426 396 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 GK2Q14410 553 aaPredicted RBP17.2■□□□□ 0.34
GTF3A-202ENST00000419181 PLBD1Q6P4A8 553 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 ASRGL1Q7L266 308 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 PARP8Q8N3A8 854 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 OR5K1Q8NHB7 308 aa17.2■□□□□ 0.34
GTF3A-202ENST00000419181 OTULINQ96BN8 352 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms