RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ST8SIA4	Q92187	359 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	TFAP2C	Q92754	450 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	SEH1L	Q96EE3	360 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	CDCA4	Q9BXL8	241 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	CENPH	Q9H3R5	247 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	C12orf10	Q9HB07	376 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	EMC7	Q9NPA0	242 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	A4GALT	Q9NPC4	353 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	ERVK-18	Q9QC07	812 aa		6.97	□□□□□ -1.29
NIF3L1-206	ENST00000416651	ELOVL7	A1L3X0	281 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651		H3BSA7	217 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	KPNA4	O00629	521 aa	Predicted RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	SURF4	O15260	269 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	LIPF	P07098	398 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANOS1	P23352	680 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CPT2	P23786	658 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	LMO1	P25800	156 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	SERPINB5	P36952	375 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANXA11	P50995	505 aa	Known RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZNF84	P51523	738 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZNF133	P52736	654 aa	Predicted RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	RAD23A	P54725	363 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	DSTN	P60981	165 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	BLCAP	P62952	87 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	SLC35A2	P78381	396 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZNF74	Q16587	644 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZNF181	Q2M3W8	571 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CDON	Q4KMG0	1287 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PLA1A	Q53H76	456 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANXA8L1	Q5VT79	327 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CD276	Q5ZPR3	534 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ETV3L	Q6ZN32	361 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	C18orf65	Q6ZTR6	163 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	DPPA2	Q7Z7J5	298 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	FAM90A1	Q86YD7	464 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	DYNAP	Q8N1N2	210 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	LINC00482	Q8N8I6	264 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PNLDC1	Q8NA58	520 aa	Known RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	BEND2	Q8NDZ0	799 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	SDR9C7	Q8NEX9	313 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	OR8G5	Q8NG78	346 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	OR6S1	Q8NH40	331 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	OR5R1	Q8NH85	324 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	MOSPD2	Q8NHP6	518 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	VANGL1	Q8TAA9	524 aa	Predicted RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	IFT81	Q8WYA0	676 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANP32B	Q92688	251 aa	Known RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	RCC1L	Q96I51	464 aa	Known RBP	6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PANX1	Q96RD7	426 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	SEPHS2	Q99611	448 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	MUC13	Q9H3R2	512 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ELOVL3	Q9HB03	270 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ADA2	Q9NZK5	511 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	P2RX2	Q9UBL9	471 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	BTNL2	Q9UIR0	455 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CAPN7	Q9Y6W3	813 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	KIAA1109	Q2LD37	5005 aa		6.96	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ALMS1	Q8TCU4	4167 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ITM2A	O43736	263 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANGPTL7	O43827	346 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	OR6A2	O95222	327 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PAH	P00439	452 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	IGHG1	P01857	330 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PF4V1	P10720	104 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ACADS	P16219	412 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	FUT1	P19526	365 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	AMY2B	P19961	511 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	GSTM3	P21266	225 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	S100A3	P33764	101 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ARHGDIA	P52565	204 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CRISP3	P54108	245 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	UGT2B15	P54855	530 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CCDC153	Q494R4	210 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	KLHL22	Q53GT1	634 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	FAM27B	Q5VT28	67 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ULK3	Q6PHR2	472 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZER1	Q7Z7L7	766 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	IGFN1	Q86VF2	1251 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	TMEM219	Q86XT9	240 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	RBM45	Q8IUH3	476 aa	Known RBP	6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	LY6G5B	Q8NDX9	201 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	AEN	Q8WTP8	325 aa	Known RBP	6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	PTP4A1	Q93096	173 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	TESC	Q96BS2	214 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	RCHY1	Q96PM5	261 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	CCL13	Q99616	98 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	DCTN5	Q9BTE1	182 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	TMPRSS5	Q9H3S3	457 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	TRIM36	Q9NQ86	728 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	TBCCD1	Q9NVR7	557 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ASIC5	Q9NY37	505 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ANGPT4	Q9Y264	503 aa		6.95	□□□□□ -1.3
NIF3L1-206	ENST00000416651		A0A0G2JPF8	293 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	HNRNPCL2	B2RXH8	293 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	HNRNPCL3	B7ZW38	293 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651		H0YHG0	523 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	BLOC1S5-TXNDC5	H3BN57	136 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	LGALS8	O00214	317 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	ZSCAN12	O43309	604 aa		6.94	□□□□□ -1.3
NIF3L1-206	ENST00000416651	HNRNPCL1	O60812	293 aa	Known RBP	6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms