RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 POLE4Q9NR33 117 aa5.28□□□□□ -1.56
RPA3-204ENST00000406109 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
RPA3-204ENST00000406109 TREM2Q9NZC2 230 aa5.28□□□□□ -1.56
RPA3-204ENST00000406109 EIF3KQ9UBQ5 218 aaKnown RBP5.28□□□□□ -1.56
RPA3-204ENST00000406109 KLHL21Q9UJP4 597 aa5.28□□□□□ -1.56
RPA3-204ENST00000406109 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
RPA3-204ENST00000406109 BAIAP2Q9UQB8 552 aa5.28□□□□□ -1.56
RPA3-204ENST00000406109 DNAH1Q9P2D7 4330 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 IGLV1-36A0A0B4J1U3 117 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 C5orf49A4QMS7 147 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 FAM183AA6NL82 134 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 RIIAD1A6NNX1 92 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ANKRD65E5RJM6 399 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 DCTN6O00399 190 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 MITFO75030 526 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 RP2O75695 350 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 NCR1O76036 304 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 BAG2O95816 211 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 PNPP00491 289 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 FSHBP01225 129 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 IFNGP01579 166 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 HMGN1P05114 100 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 GYPBP06028 91 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF35P13682 527 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF823P16415 610 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ADRA2CP18825 462 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 NR4A1P22736 598 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 STOMP27105 288 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 GRK5P34947 590 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 GDI2P50395 445 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 CRISP1P54107 249 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 LSM6P62312 80 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 TEKQ02763 1124 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 SCGB2A2Q13296 93 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 SNTB2Q13425 540 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 DAG1Q14118 895 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 CRMP1Q14194 572 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ENDOGQ14249 297 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 MEP1BQ16820 701 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 TBC1D28Q2M2D7 210 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 HIST2H2BDQ6DRA6 164 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF774Q6NX45 483 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 SLC27A4Q6P1M0 643 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZFP1Q6P2D0 407 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 FAHD1Q6P587 224 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 C1QL2Q7Z5L3 287 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 SYT9Q86SS6 491 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF584Q8IVC4 421 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 PROKR2Q8NFJ6 384 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 OR51L1Q8NGJ5 315 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 OR9Q1Q8NGQ5 310 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 OR2T4Q8NH00 348 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 OR51F2Q8NH61 342 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 TAF15Q92804 592 aaKnown RBP eCLIP5.27□□□□□ -1.57
RPA3-204ENST00000406109 DVL3Q92997 716 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 PTP4A1Q93096 173 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 CENPNQ96H22 339 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 C1orf147Q96MC9 270 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 DDOQ99489 341 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 LYSTQ99698 3801 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 WACQ9BTA9 647 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 TEX12Q9BXU0 123 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 MRPL37Q9BZE1 423 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 OR2H1Q9GZK4 316 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 WNT5BQ9H1J7 359 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 C1orf198Q9H425 327 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 MED20Q9H944 212 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 S100A14Q9HCY8 104 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 KRT84Q9NSB2 600 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF275Q9NSD4 429 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 TVP23BQ9NYZ1 205 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 MYEF2Q9P2K5 600 aaKnown RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 OPN4Q9UHM6 478 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 FBXO9Q9UK97 447 aaPredicted RBP5.27□□□□□ -1.57
RPA3-204ENST00000406109 POLR1DQ9Y2S0 133 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 ZNF281Q9Y2X9 895 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 GRIP1Q9Y3R0 1128 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 CMAHPQ9Y471 501 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 DOCK11Q5JSL3 2073 aa5.27□□□□□ -1.57
RPA3-204ENST00000406109 RYR2Q92736 4967 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 LOC100509620A0A075B734 347 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 TVP23AA6NH52 213 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 SAC3D1A6NKF1 404 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 PRR23D1E9PI22 279 aaPredicted RBP5.26□□□□□ -1.57
RPA3-204ENST00000406109 H3BNX3 289 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 RER1O15258 196 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 SURF4O15260 269 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 SGCEO43556 437 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 PLPP2O43688 288 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 TFP02787 698 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 LCKP06239 509 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 FAM157BP0CG42 384 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 PRR23D2P0DMB1 279 aaPredicted RBP5.26□□□□□ -1.57
RPA3-204ENST00000406109 CLUP10909 449 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 ZNF3P17036 446 aa5.26□□□□□ -1.57
RPA3-204ENST00000406109 PAICSP22234 425 aaKnown RBP5.26□□□□□ -1.57
RPA3-204ENST00000406109 ACHEP22303 614 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms