RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 COX15Q7KZN9 410 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 SLC43A2Q8N370 569 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 CNTD2Q9H8S5 307 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 PRMT8Q9NR22 394 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-203ENST00000397763 UPB1Q9UBR1 384 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 TMEM269A0A1B0GVZ9 245 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 ADAP1O75689 374 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 S100A6P06703 90 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 CD1CP29017 333 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 PTGFRP43088 359 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 AIMP2Q13155 320 aaKnown RBP12.31□□□□□ -0.44
COL6A2-203ENST00000397763 ISXQ2M1V0 245 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 C9orf50Q5SZB4 431 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 C7orf61Q8IZ16 206 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 NUBPLQ8TB37 319 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 RNF128Q8TEB7 428 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 FAM117AQ9C073 453 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 A0A1W2PP11 408 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ACAA1P09110 424 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-203ENST00000397763 THEGLP0DJG4 465 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 EFNA3P52797 238 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 SLC37A1P57057 533 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ELOCQ15369 112 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 FNDC7Q5VTL7 733 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 C1orf189Q5VU69 101 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 OR13C9Q8NGT0 318 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 NUDT9Q9BW91 350 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 TBL1XR1Q9BZK7 514 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
COL6A2-203ENST00000397763 CSAG2Q9Y5P2 127 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 STK17BO94768 372 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF432O94892 652 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 BGLAPP02818 100 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 FABP1P07148 127 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 IL12BP29460 328 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 AKT2P31751 481 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 CTHP32929 405 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 MPPED2Q15777 294 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ADGRE4PQ86SQ3 457 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 COMMD2Q86X83 199 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 ARHGEF39Q8N4T4 335 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 CNTNAP3BQ96NU0 1288 aa12.3□□□□□ -0.44
COL6A2-203ENST00000397763 EPOPA6NHQ4 379 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 SULT2B1O00204 365 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF208O43345 1280 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 TXNL1O43396 289 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 OR2F2O95006 317 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 ANOS1P23352 680 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 SERPINF1P36955 418 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 NPY4RP50391 375 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 POLR2GP62487 172 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL6A2-203ENST00000397763 DLX2Q07687 328 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-203ENST00000397763 OR2F1Q13607 317 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 RSPO4Q2I0M5 234 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-203ENST00000397763 PRTGQ2VWP7 1150 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 NKAPLQ5M9Q1 402 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 TMEM229BQ8NBD8 167 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 C8orf44Q96CB5 159 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 RRNAD1Q96FB5 475 aaKnown RBP12.29□□□□□ -0.44
COL6A2-203ENST00000397763 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 BANF2Q9H503 90 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 FN3KRPQ9HA64 309 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 MYF5P13349 255 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 PPT1P50897 306 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 RPL27P61353 136 aaKnown RBP12.29□□□□□ -0.44
COL6A2-203ENST00000397763 ARL11Q969Q4 196 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 ARL5BQ96KC2 179 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 GABRG3Q99928 467 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 C1orf198Q9H425 327 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 ZFP57Q9NU63 452 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 VDAC3Q9Y277 283 aa12.29□□□□□ -0.44
COL6A2-203ENST00000397763 C9orf170A2RU37 121 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 MSGN1A6NI15 193 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 H3BML4 177 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 HTR3BO95264 441 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 SEMA4FO95754 770 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 TXNDC12O95881 172 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 RORAP35398 523 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 PNLIPRP2P54317 469 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 RIPPLY1Q0D2K3 151 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 SMCO1Q147U7 214 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL6A2-203ENST00000397763 TMPRSS9Q7Z410 1059 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 GPBAR1Q8TDU6 330 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
COL6A2-203ENST00000397763 OR52A1Q9UKL2 312 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 IGLV1-36A0A0B4J1U3 117 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 ID4P47928 161 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 UNC119Q13432 240 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 CCINQ13939 588 aa12.28□□□□□ -0.44
COL6A2-203ENST00000397763 CATSPERDQ86XM0 798 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms