RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CDK5R2Q13319 367 aa17.03■□□□□ 0.32
TMEM53-205ENST00000372244 PARP8Q8N3A8 854 aa17.03■□□□□ 0.32
TMEM53-205ENST00000372244 MED20Q9H944 212 aa17.03■□□□□ 0.32
TMEM53-205ENST00000372244 ZNF275Q9NSD4 429 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-205ENST00000372244 DECR2Q9NUI1 292 aa17.03■□□□□ 0.32
TMEM53-205ENST00000372244 FAM183AA6NL82 134 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 F5H5K5 113 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 SURF4O15260 269 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 SPRY3O43610 288 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 FASP25445 335 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 OTX1P32242 354 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-205ENST00000372244 ENTPD1P49961 510 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 HLXQ14774 488 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-205ENST00000372244 TSTQ16762 297 aaKnown RBP17.02■□□□□ 0.32
TMEM53-205ENST00000372244 C6orf52Q5T4I8 152 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 NAA40Q86UY6 237 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 DIRC2Q96SL1 478 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 MARCH7Q9H992 704 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 MSL2Q9HCI7 577 aa17.02■□□□□ 0.32
TMEM53-205ENST00000372244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMEM53-205ENST00000372244 LRP5LA4QPB2 252 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 TIMM8AO60220 97 aaPredicted RBP17.01■□□□□ 0.31
TMEM53-205ENST00000372244 CD55P08174 381 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 GZMKP49863 264 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 PPP2R2BQ00005 443 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 TRIP10Q15642 601 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 KRTAP21-3Q3LHN1 58 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 ZMAT1Q5H9K5 638 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 Q6ZR03 302 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 DCXRQ7Z4W1 244 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 HIPK1Q86Z02 1210 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 OR6K6Q8NGW6 343 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 HPS1Q92902 700 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 MSI2Q96DH6 328 aaKnown RBP17.01■□□□□ 0.31
TMEM53-205ENST00000372244 SLC25A19Q9HC21 320 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 YAE1D1Q9NRH1 226 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 PAPOLBQ9NRJ5 636 aaKnown RBP17.01■□□□□ 0.31
TMEM53-205ENST00000372244 MALRD1Q5VYJ5 2156 aa17.01■□□□□ 0.31
TMEM53-205ENST00000372244 IGHV1-69-2A0A0G2JMI3 117 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 A8MV72 311 aaPredicted RBP17■□□□□ 0.31
TMEM53-205ENST00000372244 G3V2T6 193 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 GLCEO94923 617 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 CHN2P52757 468 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 CRISP1P54107 249 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 TPTEP56180 551 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 TMEM236Q5W0B7 351 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 ST7LQ8TDW4 575 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 SAP30LQ9HAJ7 183 aa17■□□□□ 0.31
TMEM53-205ENST00000372244 CDC14BO60729 498 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 CRLF1O75462 422 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 CIB2O75838 187 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 FCGR1AP12314 374 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PAICSP22234 425 aaKnown RBP16.99■□□□□ 0.31
TMEM53-205ENST00000372244 GSTT1P30711 240 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 GPR6P46095 362 aaPredicted RBP16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PLBD1Q6P4A8 553 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 USP51Q70EK9 711 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 AMIGO2Q86SJ2 522 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 ZDHHC13Q8IUH4 622 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 CPOQ8IVL8 374 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 TIGD4Q8IY51 512 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 LRTOMTQ8WZ04 291 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 SPTSSAQ969W0 71 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 C1orf159Q96HA4 380 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 SOX7Q9BT81 388 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 EGLN1Q9GZT9 426 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PRR23D1E9PI22 279 aaPredicted RBP16.99■□□□□ 0.31
TMEM53-205ENST00000372244 M0R135 149 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 SPARCP09486 303 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PRR23D2P0DMB1 279 aaPredicted RBP16.99■□□□□ 0.31
TMEM53-205ENST00000372244 IL2RGP31785 369 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 ACTR3P61158 418 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 ESRRGP62508 458 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PTGES3Q15185 160 aaKnown RBP16.99■□□□□ 0.31
TMEM53-205ENST00000372244 SPRNQ5BIV9 151 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 KDM4DQ6B0I6 523 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 RHOUQ7L0Q8 258 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 SLAMF6Q96DU3 332 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 ZNF799Q96GE5 643 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 INTS14Q96SY0 518 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 TEX12Q9BXU0 123 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 OR51V1Q9H2C8 321 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 PTTG3PQ9NZH4 202 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 CACNG2Q9Y698 323 aa16.99■□□□□ 0.31
TMEM53-205ENST00000372244 A0A1B0GWJ7 208 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 WNT9BO14905 357 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 TPD52L2O43399 206 aaKnown RBP16.98■□□□□ 0.31
TMEM53-205ENST00000372244 PPIHO43447 177 aaKnown RBP16.98■□□□□ 0.31
TMEM53-205ENST00000372244 LCATP04180 440 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 GK2Q14410 553 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-205ENST00000372244 OR2T2Q6IF00 324 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 DPY19L4Q7Z388 723 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 OR8G5Q8NG78 346 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 OTULINQ96BN8 352 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 ELMOD3Q96FG2 381 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 CENPNQ96H22 339 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-205ENST00000372244 GABARAPL1Q9H0R8 117 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 TMEM160Q9NX00 188 aa16.98■□□□□ 0.31
TMEM53-205ENST00000372244 KIF17Q9P2E2 1029 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms