RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 GLB1L2Q8IW92 636 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 CCDC197Q8NCU1 140 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 OR5L1Q8NGL2 311 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
GDPD3-201ENST00000360688 PLEKHA8Q96JA3 519 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
GDPD3-201ENST00000360688 SYT4Q9H2B2 425 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 RERGLQ9H628 205 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 NMNAT1Q9HAN9 279 aaPredicted RBP12.57□□□□□ -0.4
GDPD3-201ENST00000360688 SPAG4Q9NPE6 437 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 ABCD2Q9UBJ2 740 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 MMP24Q9Y5R2 645 aa12.57□□□□□ -0.4
GDPD3-201ENST00000360688 KIR2DS1A0A191URI9 304 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 F5H5P2 479 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
GDPD3-201ENST00000360688 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
GDPD3-201ENST00000360688 FSTL3O95633 263 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 SDHAP31040 664 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 MNAT1P51948 309 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 ZNF404Q494X3 552 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 FAM201AQ5SY85 155 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 APOBEC3DQ96AK3 386 aaPredicted RBP12.56□□□□□ -0.4
GDPD3-201ENST00000360688 KCTD14Q9BQ13 255 aaPredicted RBP12.56□□□□□ -0.4
GDPD3-201ENST00000360688 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 PRDM13Q9H4Q3 707 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
GDPD3-201ENST00000360688 VSX1Q9NZR4 365 aaPredicted RBP12.56□□□□□ -0.4
GDPD3-201ENST00000360688 IQCF6A8MYZ5 107 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 CXCR6O00574 342 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 ZNF682O95780 498 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 PMELP40967 661 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 PITPNBP48739 271 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 KCNMB1Q16558 191 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 MIDNQ504T8 468 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 IFI44LQ53G44 452 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 GPR139Q6DWJ6 353 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 PTCHD4Q6ZW05 846 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 RRM2BQ7LG56 351 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 C1orf87Q8N0U7 546 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 FITM2Q8N6M3 262 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 OR8B3Q8NGG8 313 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 OR10S1Q8NGN2 331 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 OR8B2Q96RD0 313 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
GDPD3-201ENST00000360688 NDEL1Q9GZM8 345 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 NUAK2Q9H093 628 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 ARL8BQ9NVJ2 186 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 SIGLEC7Q9Y286 467 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 TMEM5Q9Y2B1 443 aa12.55□□□□□ -0.4
GDPD3-201ENST00000360688 A0A1B0GWJ7 208 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 LRRC30A6NM36 301 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 PTP4A3O75365 173 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 NDUFB2O95178 105 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 SELEP16581 610 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 HIST1H3AP68431 136 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 MXRA7P84157 204 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
GDPD3-201ENST00000360688 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 C16orf89Q6UX73 402 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 LYPD2Q6UXB3 125 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 CBLL1Q75N03 491 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 TSEN54Q7Z6J9 526 aaKnown RBP12.54□□□□□ -0.4
GDPD3-201ENST00000360688 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 GJC3Q8NFK1 279 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 FAM46AQ96IP4 442 aaKnown RBP12.54□□□□□ -0.4
GDPD3-201ENST00000360688 GPX7Q96SL4 187 aaPredicted RBP12.54□□□□□ -0.4
GDPD3-201ENST00000360688 COQ7Q99807 217 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 HDHD2Q9H0R4 259 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 ANKRD19PQ9H560 264 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 WDR76Q9H967 626 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 ADA2Q9NZK5 511 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 IER3IP1Q9Y5U9 82 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 LHFPL6Q9Y693 200 aa12.54□□□□□ -0.4
GDPD3-201ENST00000360688 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 SRRM5B3KS81 715 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 SOCS2O14508 198 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 GMNNO75496 209 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 HLA-DPB1P04440 258 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 FPR3P25089 353 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 CDKN2AP42771 156 aaKnown RBP12.53□□□□□ -0.4
GDPD3-201ENST00000360688 GATA4P43694 442 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 FXYD6P3P58550 94 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 FGF12P61328 243 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 SRSF4Q08170 494 aaKnown RBP12.53□□□□□ -0.4
GDPD3-201ENST00000360688 OCLNQ16625 522 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 MEP1BQ16820 701 aa12.53□□□□□ -0.4
GDPD3-201ENST00000360688 WDR25Q64LD2 544 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms