RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 LTBRP36941 435 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 GSK3AP49840 483 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 LUMP51884 338 aaPredicted RBP7.76□□□□□ -1.17
CLK1-201ENST00000321356 ATP1B3P54709 279 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 GPR85P60893 370 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 HSD11B2P80365 405 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 CDNFQ49AH0 187 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 FAM74A1Q5RGS3 127 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 PRAMEF17Q5VTA0 474 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 C3orf33Q6P1S2 294 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 H1FNTQ75WM6 255 aaPredicted RBP7.76□□□□□ -1.17
CLK1-201ENST00000321356 TRAPPC6BQ86SZ2 158 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 LINC00346Q8IVM7 164 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 CARFQ8N187 725 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 KDM8Q8N371 416 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 SLC22A24Q8N4F4 322 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 DTWD2Q8NBA8 298 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 TMEM234Q8WY98 164 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 FAM46BQ96A09 425 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 FGGYQ96C11 551 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 ZNF75AQ96N20 296 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 NPAS1Q99742 590 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 B3GNT4Q9C0J1 378 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 VN1R1Q9GZP7 353 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 ZNF304Q9HCX3 659 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 FANCFQ9NPI8 374 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 SLC2A4RGQ9NR83 387 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 COMMD9Q9P000 198 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 MYEF2Q9P2K5 600 aaKnown RBP7.76□□□□□ -1.17
CLK1-201ENST00000321356 KLHL13Q9P2N7 655 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 NPIPA1Q9UND3 350 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 PHF3Q92576 2039 aaKnown RBP7.76□□□□□ -1.17
CLK1-201ENST00000321356 IGHV1OR15-9A0A0B4J2B8 117 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ANKUB1A6NFN9 424 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 DBX1A6NMT0 343 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR2AT4A6NND4 320 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 MPTX1A8MV57 137 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ATP6V1G2-DDX39BF2Z307 99 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 LMO7DNF2Z398 122 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 EFSO43281 561 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 STK17BO94768 372 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 APOC3P02656 99 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 H2BFMP0C1H6 154 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 VSIG8P0DPA2 414 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 LIPCP11150 499 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CD27P26842 260 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CD38P28907 300 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 DLSTP36957 453 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CASRP41180 1078 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 EIF1AXP47813 144 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 PPM1FP49593 454 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 PPIAP62937 165 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 HSF1Q00613 529 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SQSTM1Q13501 440 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 TAF13Q15543 124 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 C14orf28Q4W4Y0 310 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PAN3Q58A45 887 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR2W3Q7Z3T1 314 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CD163Q86VB7 1156 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 TMEM17Q86X19 198 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 GVQW1Q8N7I0 195 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR1M1Q8NGA1 313 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR52N4Q8NGI2 321 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 RLN3Q8WXF3 142 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CMBLQ96DG6 245 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ADAT3Q96EY9 351 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 SEC22AQ96IW7 307 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ARL5BQ96KC2 179 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PDCD10Q9BUL8 212 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 FN3KRPQ9HA64 309 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CHST11Q9NPF2 352 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SEMA5BQ9P283 1151 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 CTSFQ9UBX1 484 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ANAPC10Q9UM13 185 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ADAMTS9Q9P2N4 1935 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ADAMTS20P59510 1910 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ARID1BQ8NFD5 2236 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 TRBV6-7A0A0A0MS04 114 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 TMEM14DPA8MWL7 114 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ETV2O00321 342 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 ZNF208O43345 1280 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SSX5O60225 188 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 DUS4LO95620 317 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 CSN2P05814 226 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 DCNP07585 359 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 HRH1P35367 487 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 APOBEC1P41238 236 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 STARP49675 285 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SUMO3P55854 103 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 SNTB1Q13884 538 aaKnown RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 DEFB133Q30KQ1 61 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SLC22A6Q4U2R8 563 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR52W1Q6IF63 320 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 LANCL3Q6ZV70 420 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SYT13Q7L8C5 426 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PRSS58Q8IYP2 241 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms