RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ACSM4P0C7M7 580 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 FPR3P25089 353 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 ETV1P50549 477 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 KIAA1024LP59773 190 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 PAX5Q02548 391 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF789Q5FWF6 425 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 LAIR1Q6GTX8 287 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 FAM122BQ7Z309 247 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 TP53INP2Q8IXH6 220 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 LRRC56Q8IYG6 542 aaPredicted RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 OR5D13Q8NGL4 314 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 OR1A1Q9P1Q5 309 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 FOXK2Q01167 660 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 PLK5Q496M5 336 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 Q6ZPB1 254 aaPredicted RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 A0A1W2PPQ1 181 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 TLCD2A6NGC4 264 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 PCBP4P57723 403 aaKnown RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF154Q13106 437 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 B3GNTL1Q67FW5 361 aaPredicted RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 OR52I1Q8NGK6 324 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 OR1J1Q8NGS3 322 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 NRSN2Q9GZP1 204 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.74
PTPN4-201ENST00000263708 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 LILRB4Q8NHJ6 448 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 LHX4Q969G2 390 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
PTPN4-201ENST00000263708 FOXC1Q12948 553 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.75
PTPN4-201ENST00000263708 TTC9Q92623 222 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 FBXO17Q96EF6 278 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF764Q96H86 408 aaPredicted RBP10.4□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF318Q5VUA4 2279 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 A0A1B0GTW7 788 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 CTDSP2O14595 271 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 ST8SIA3O43173 380 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 QDPRP09417 244 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 SBK2P0C263 348 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 AOAHP28039 575 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 NRARPQ7Z6K4 114 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF511Q8NB15 262 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 TMEM18Q96B42 140 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 TXNIPQ9H3M7 391 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 RICTORQ6R327 1708 aa10.4□□□□□ -0.75
PTPN4-201ENST00000263708 SNNO75324 88 aaPredicted RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SOD1P00441 154 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SLC19A1P41440 591 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 YPEL5P62699 121 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 CLEC9AQ6UXN8 241 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 CORINQ9Y5Q5 1042 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 UBL3O95164 117 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 HTR1FP30939 366 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 PMP22Q01453 160 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 NCR3LG1Q68D85 454 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 ZDHHC23Q8IYP9 409 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SLC38A6Q8IZM9 456 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 GPR150Q8NGU9 434 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 WBP2Q969T9 261 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 GALMQ96C23 342 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 FZR1Q9UM11 496 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 J3KRW8 73 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 AQP8O94778 261 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 PPP1CBP62140 327 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 RANP62826 216 aaKnown RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SMN1Q16637 294 aaKnown RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 OR51E1Q8TCB6 317 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 USP3Q9Y6I4 520 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 KIAA0100Q14667 2235 aaKnown RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 FCGR2CP31995 323 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 ASCL1P50553 236 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 PRDX1Q06830 199 aaKnown RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 YOD1Q5VVQ6 348 aaPredicted RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 TMEM207Q6UWW9 146 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 RXFP4Q8TDU9 374 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 ORM1P02763 201 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 S100A8P05109 93 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 RAB1AP62820 205 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 ATP5SQ99766 215 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 TIMM10BQ9Y5J6 103 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 KIAA1324LA8MWY0 1029 aaPredicted RBP10.39□□□□□ -0.75
PTPN4-201ENST00000263708 HPP00738 406 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 TCRBP04435 133 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 COX5AP20674 150 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 C21orf58P58505 322 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 RHOUQ7L0Q8 258 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 A0A1B0GTQ1 180 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 CR2P20023 1033 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 DEFB103AP81534 67 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 HTRA3P83110 453 aa10.39□□□□□ -0.75
PTPN4-201ENST00000263708 TPBGQ13641 420 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms