RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PRRT1Q99946 306 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 ESRP2Q9H6T0 727 aaKnown RBP16.06■□□□□ 0.16
TRAF4-201ENST00000262395 LDLRAD4O15165 306 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 NFYBP25208 207 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 NPBWR1P48145 328 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 SLC9A3R2Q15599 337 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 HFEQ30201 348 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 ZNF260Q3ZCT1 412 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 H3F3CQ6NXT2 135 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 PAQR4Q8N4S7 273 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-201ENST00000262395 MITD1Q8WV92 249 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 NICN1Q9BSH3 213 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 S1PR5Q9H228 398 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 SLC5A6Q9Y289 635 aa16.06■□□□□ 0.16
TRAF4-201ENST00000262395 KLF2Q9Y5W3 355 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-201ENST00000262395 IGKV1D-43A0A0B4J1Z2 117 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 OR2T1O43869 369 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ADAP1O75689 374 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 IFNA6P05013 189 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 CFPP27918 469 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 PPICP45877 212 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 GFERP55789 205 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ROM1Q03395 351 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 SVBPQ8N300 66 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 OR4K17Q8NGC6 315 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TBL1XR1Q9BZK7 514 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 MKL2Q9ULH7 1088 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 KCNK7Q9Y2U2 307 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ZNF705EA8MWA4 302 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 EFSO43281 561 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 FARS2O95363 451 aaKnown RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 NSA2O95478 260 aaKnown RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 GP1BBP13224 206 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ARRB1P49407 418 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 NKAPLQ5M9Q1 402 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TTLL10Q6ZVT0 673 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 COX15Q7KZN9 410 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ASB13Q8WXK3 278 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TGM7Q96PF1 710 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 G6PC2Q9NQR9 355 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ZNF629Q9UEG4 869 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TMED7-TICAM2A0A0A6YYA0 188 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 KIR2DS5A0A0G2JLQ3 304 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 A0A0G2JNG1 304 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 METTL21EPA6NDL7 271 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 MSGN1A6NI15 193 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TMEM200CA6NKL6 621 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 KIR2DS3K7RE56 304 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 PSMB6P28072 239 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 HSD17B7P56937 341 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 KIR2DS5Q14953 304 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 LPCAT3Q6P1A2 487 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 C16orf47Q6ZP98 133 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 OR5T2Q8NGG2 359 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 OR13C9Q8NGT0 318 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 AQP3Q92482 292 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 PIK3IP1Q96FE7 263 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 CMSS1Q9BQ75 279 aaKnown RBP16.05■□□□□ 0.16
TRAF4-201ENST00000262395 LAT2Q9GZY6 243 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 SLCO5A1Q9H2Y9 848 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 TXNIPQ9H3M7 391 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 HRH4Q9H3N8 390 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 R4GMQ9 66 aa16.05■□□□□ 0.16
TRAF4-201ENST00000262395 ZNF823P16415 610 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 NPY4RP50391 375 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 POLR2GP62487 172 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 GLO1Q04760 184 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 AIMP2Q13155 320 aaKnown RBP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 MEF2DQ14814 521 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 SGCBQ16585 318 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 CCDC157Q569K6 752 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 FOXRED2Q8IWF2 684 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 MED29Q9NX70 200 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 DHCR7Q9UBM7 475 aaKnown RBP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 PCDH15Q96QU1 1955 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 OR4A4PQ8NGN8 299 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 THRSPQ92748 146 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 ADAT3Q96EY9 351 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 PHYHIPLQ96FC7 376 aa16.04■□□□□ 0.16
TRAF4-201ENST00000262395 CCNL2Q96S94 520 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-201ENST00000262395 MED12Q93074 2177 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 FAM221BA6H8Z2 402 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 H0YIZ8 118 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 AGPAT2O15120 278 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 RORAP35398 523 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 PNLIPRP2P54317 469 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 C1orf140Q5VVS0 124 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 ZSCAN4Q8NAM6 433 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-201ENST00000262395 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-201ENST00000262395 CEP290O15078 2479 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 IGHV5-51A0A0C4DH38 117 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 CRHP06850 196 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 THEGLP0DJG4 465 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 VSIG8P0DPA2 414 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 CTHP32929 405 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 KCNJ3P48549 501 aa16.03■□□□□ 0.16
TRAF4-201ENST00000262395 SRSF4Q08170 494 aaKnown RBP16.03■□□□□ 0.16
TRAF4-201ENST00000262395 FAM209BQ5JX69 171 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms