RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PLAUP00749 431 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 H2BFMP0C1H6 154 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 LIMS3P0CW19 117 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 LIMS4P0CW20 117 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 CRHBPP24387 322 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 GLRXP35754 106 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 RAD52P43351 418 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 UCP2P55851 309 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 RPS23P62266 143 aaKnown RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 ACTA2P62736 377 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 ACTG2P63267 376 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 GALK2Q01415 458 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 GALEQ14376 348 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 LRRN1Q6UXK5 716 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 UNQ6126/PRO20091Q6UXV3 157 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 PLEKHG7Q6ZR37 379 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 PRSS45Q7RTY3 260 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 KRT77Q7Z794 578 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 ZNF101Q8IZC7 436 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 SYS1Q8N2H4 156 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 MRPL48Q96GC5 212 aaKnown RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 COG8Q96MW5 612 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 DOK1Q99704 481 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 YTHDF1Q9BYJ9 559 aaKnown RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 CENPMQ9NSP4 180 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 SCN3BQ9NY72 215 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 EIF3KQ9UBQ5 218 aaKnown RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 EXOSC1Q9Y3B2 195 aaKnown RBP12.17□□□□□ -0.46
VPS25-201ENST00000253794 TPRKBQ9Y3C4 175 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 LRP12Q9Y561 859 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 DAPL1A0PJW8 107 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 METTL15A6NJ78 407 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 E7EQL1 145 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 F5H5K5 113 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 KRT8P05787 483 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 ADRA2AP08913 450 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 MMP16P51512 607 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 RIDAP52758 137 aaKnown RBP12.16□□□□□ -0.46
VPS25-201ENST00000253794 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
VPS25-201ENST00000253794 ST3GAL4Q11206 333 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 TAF13Q15543 124 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 ZNF544Q6NX49 715 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 ZNF540Q8NDQ6 660 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 TMEM171Q8WVE6 324 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
VPS25-201ENST00000253794 TBX5Q99593 518 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 CDCA4Q9BXL8 241 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
VPS25-201ENST00000253794 PLEKHF2Q9H8W4 249 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 SP140LQ9H930 580 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 CA10Q9NS85 328 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 PAK1IP1Q9NWT1 392 aaPredicted RBP12.16□□□□□ -0.46
VPS25-201ENST00000253794 BLOC1S6Q9UL45 172 aa12.16□□□□□ -0.46
VPS25-201ENST00000253794 RTTNQ86VV8 2226 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 TRIM64A6NGJ6 449 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 HS3ST1O14792 307 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 CDK1P06493 297 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 CCNOP22674 350 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 HSD11B1P28845 292 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 CX3CR1P49238 355 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 GABARAPL2P60520 117 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 SNTB2Q13425 540 aaKnown RBP12.15□□□□□ -0.46
VPS25-201ENST00000253794 ZNF787Q6DD87 383 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 AHSA2Q719I0 299 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 SPATC1Q76KD6 591 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.15□□□□□ -0.46
VPS25-201ENST00000253794 ZNF611Q8N823 705 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 SNX33Q8WV41 574 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 RNF166Q96A37 237 aaPredicted RBP12.15□□□□□ -0.46
VPS25-201ENST00000253794 DHRS9Q9BPW9 319 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 ALG8Q9BVK2 526 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 MOB1AQ9H8S9 216 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 FAM206AQ9NX38 181 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 IKZF2Q9UKS7 526 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 LRCH1Q9Y2L9 728 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 CAB39Q9Y376 341 aaPredicted RBP12.15□□□□□ -0.46
VPS25-201ENST00000253794 GRIP1Q9Y3R0 1128 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 TACC2O95359 2948 aa12.15□□□□□ -0.46
VPS25-201ENST00000253794 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
VPS25-201ENST00000253794 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 MRPS14O60783 128 aaKnown RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 NGFP01138 241 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 TACSTD2P09758 323 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF250P15622 560 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 MYL12AP19105 171 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 APOBEC3AP31941 199 aaPredicted RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 EVX1P49640 407 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ETV1P50549 477 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 PRKXP51817 358 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 ZNF121P58317 390 aaPredicted RBP12.14□□□□□ -0.47
VPS25-201ENST00000253794 PPP1CBP62140 327 aa12.14□□□□□ -0.47
VPS25-201ENST00000253794 MVKQ03426 396 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 410.2 ms