RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KLHDC8BQ8IXV7 354 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 PLA2G12AQ9BZM1 189 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 AK3Q9UIJ7 227 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 FLVCR1Q9Y5Y0 555 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 ARPC4-TTLL3A0A0A6YYG9 625 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 NDUFB3O43676 98 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 RPL18Q07020 188 aaKnown RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 PLA1AQ53H76 456 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM99Q8N816 258 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 OR7C2O60412 319 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 SEMG1P04279 462 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 CHRM2P08172 466 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 GLI4P10075 376 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 CASP3P42574 277 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 FGF14Q92915 247 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 WBP2Q969T9 261 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 MED29Q9NX70 200 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 URGCP-MRPS24S4R325 110 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 MN1Q10571 1320 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 FER1L6Q2WGJ9 1857 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 DOC2BQ14184 412 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 OTPQ5XKR4 325 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 DHRS4L2Q6PKH6 230 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 OR2Z1Q8NG97 314 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 C16orf52Q8NHV5 167 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 SEH1LQ96EE3 360 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 TEAD3Q99594 435 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 FAM103A1Q9BTL3 118 aaKnown RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 N4BP2Q86UW6 1770 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 TRGV5A0A0B4J1U4 118 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 FABP7O15540 132 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.48
COL1A1-201ENST00000225964 NME2P1O60361 137 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 SNCGO76070 127 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 ATP1B1P05026 303 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 ETV1P50549 477 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 GPM6AP51674 278 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 RETREG3Q86VR2 466 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.48
COL1A1-201ENST00000225964 DND1Q8IYX4 353 aaKnown RBP12.02□□□□□ -0.48
COL1A1-201ENST00000225964 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 OR52H1Q8NGJ2 320 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 M1APQ8TC57 530 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 SYT11Q9BT88 431 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 PBOV1Q9GZY1 135 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 CSAG2Q9Y5P2 127 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 C4AP0C0L4 1744 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 TERTO14746 1132 aaKnown RBP12.02□□□□□ -0.48
COL1A1-201ENST00000225964 ANGPTL7O43827 346 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 PPICP45877 212 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 RELAQ04206 551 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 OR4F5Q8NH21 305 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 OLIG1Q8TAK6 271 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 OR4F4Q96R69 305 aa12.02□□□□□ -0.48
COL1A1-201ENST00000225964 BTAF1O14981 1849 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 A0A087WZY1 265 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 FRG2CA6NGY1 282 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM200CA6NKL6 621 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 NUDT19A8MXV4 375 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 B4GALT3O60512 393 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 GLULP15104 373 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.49
COL1A1-201ENST00000225964 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 BTNL8Q6UX41 500 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 OR11G2Q8NGC1 345 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 ST8SIA1Q92185 356 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 TRDV1A0A1B0GX56 115 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 SPI1P17947 270 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 GNG10P50151 68 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 DUSP8Q13202 625 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 TEX37Q96LM6 180 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 Q56UQ5 140 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 LIPNQ5VXI9 398 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF620Q6ZNG0 422 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 ZFP62Q8NB50 900 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-201ENST00000225964 DLL4Q9NR61 685 aa12.02□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF83P51522 516 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 TRGV10A0A0A0MS01 117 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 BMI1P35226 326 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 DSCR4P56555 118 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-201ENST00000225964 FZD2Q14332 565 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 SHBQ15464 509 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ACOT6Q3I5F7 207 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ANKRD34AQ69YU3 496 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 TMUB2Q71RG4 321 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 OR10P1Q8NGE3 313 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 OR4Q3Q8NH05 313 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 OR2T6Q8NHC8 308 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 GPR78Q96P69 363 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 HES4Q9HCC6 221 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 CHST2Q9Y4C5 530 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 330.3 ms