RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 RBMY1A1P0DJD3 496 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 PRPS2P11908 318 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CCL2P13500 99 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 HOXB8P17481 243 aaPredicted RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 TCN1P20061 433 aaPredicted RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 TBPP20226 339 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 LCN1P31025 176 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SLC25A1P53007 311 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 PSMD4P55036 377 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 GPX6P59796 221 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SELENOTP62341 195 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 TNNC1P63316 161 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 TPM4P67936 248 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CXCL6P80162 114 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 COTL1Q14019 142 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SF3A2Q15428 464 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 GPR157Q5UAW9 335 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 FKBP1CQ5VVH2 108 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CLEC6AQ6EIG7 209 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ANKRD26P1Q6NSI1 321 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ULK3Q6PHR2 472 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 WDR74Q6RFH5 385 aaPredicted RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 CXCL17Q6UXB2 119 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 GPRIN3Q6ZVF9 776 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SNX20Q7Z614 316 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 PPP1R27Q86WC6 154 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CDC20BQ86Y33 519 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 APRG1Q8IVJ8 170 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CMTM1Q8IZ96 169 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 PDIK1LQ8N165 341 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 FAM86B1Q8N7N1 296 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 FBXO36Q8NEA4 188 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 OR5B3Q8NH48 314 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ANGPTL6Q8NI99 470 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ZNF502Q8TBZ5 544 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 FAM151AQ8WW52 585 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SMARCD2Q92925 531 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 NAT6Q93015 286 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CSPG4P5Q96PW8 444 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 TRNT1Q96Q11 434 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 HIST1H4GQ99525 98 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 KCTD14Q9BQ13 255 aaPredicted RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 TMEM246Q9BRR3 403 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 PELOQ9BRX2 385 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 FAIM2Q9BWQ8 316 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 HES7Q9BYE0 225 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 SELENOIQ9C0D9 397 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 OR52A5Q9H2C5 316 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 CSNK1G1Q9HCP0 422 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ZC4H2Q9NQZ6 224 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 ADAM22Q9P0K1 906 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 STX18Q9P2W9 335 aaKnown RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 V9GYY5 206 aaPredicted RBP2.43□□□□□ -2.02
VPS8-228ENST00000628962 CACNA1HO95180 2353 aa2.43□□□□□ -2.02
VPS8-228ENST00000628962 IGLV3-22A0A075B6J6 115 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 TRAV6A0A075B6T7 132 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV1OR15-1A0A075B7D0 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV3OR16-13A0A075B7E8 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGKV1D-8A0A087WSZ0 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV7-81A0A0B4J1V7 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV3-35A0A0C4DH35 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 A0A0G2JRQ6 117 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 A6NIZ1 184 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 A8MUA0 341 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 ZNF99A8MXY4 864 aaPredicted RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 K7N7A8 449 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 CDX4O14627 284 aaPredicted RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 PHF1O43189 567 aaPredicted RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 MGRN1O60291 552 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 FCN3O75636 299 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV3-13P01766 116 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 IGHV2-5P01817 119 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 HLA-HP01893 362 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 HPGDP15428 266 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 MGMTP16455 207 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 ZNF3P17036 446 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 CMA1P23946 247 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 CXCR2P25025 360 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 AQP1P29972 269 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 HTR2BP41595 481 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 NPBWR2P48146 333 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 TFPI2P48307 235 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 KLK7P49862 253 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 SSR4P51571 173 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 RAP1BP61224 184 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 ADARB1P78563 741 aaKnown RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 TCP10Q12799 353 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 ECH1Q13011 328 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 GPNMBQ14956 572 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 CYTH1Q15438 398 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 VAMP3Q15836 100 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 LRRC36Q1X8D7 754 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 TIMM50Q3ZCQ8 353 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 PAN3Q58A45 887 aaKnown RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 OR2B11Q5JQS5 317 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 KLF17Q5JT82 389 aaPredicted RBP2.42□□□□□ -2.02
VPS8-228ENST00000628962 C6orf183Q5T699 404 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 OLFML2AQ68BL7 652 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 MOB1BQ7L9L4 216 aa2.42□□□□□ -2.02
VPS8-228ENST00000628962 DEFB128Q7Z7B8 93 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms