RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLC38A5Q8WUX1 472 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 DNAJA4Q8WW22 397 aaPredicted RBP11.4□□□□□ -0.58
SNX1-214ENST00000625244 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 MEGF10Q96KG7 1140 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 EPYCQ99645 322 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 CGREF1Q99674 301 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 SIAEQ9HAT2 523 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 VAPAQ9P0L0 249 aa11.4□□□□□ -0.58
SNX1-214ENST00000625244 COX4I1P13073 169 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 ETFAP13804 333 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 PRDX6P30041 224 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 ZNF84P51523 738 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 ERVK-25P63136 954 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 RGNQ15493 299 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 ARPINQ7Z6K5 226 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 CALHM3Q86XJ0 350 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 PNLDC1Q8NA58 520 aaKnown RBP11.39□□□□□ -0.59
SNX1-214ENST00000625244 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 OR10AD1Q8NGE0 317 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 OR2T6Q8NHC8 308 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 SLC35B4Q969S0 331 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 NABP1Q96AH0 204 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 WNT5BQ9H1J7 359 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 EFCAB1Q9HAE3 211 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 ELOVL3Q9HB03 270 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 TAS2R5Q9NYW4 299 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 SLC25A37Q9NYZ2 338 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 SLAMF8Q9P0V8 285 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 CTSZQ9UBR2 303 aa11.39□□□□□ -0.59
SNX1-214ENST00000625244 FBP2O00757 339 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 OR6A2O95222 327 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
SNX1-214ENST00000625244 GSTM3P21266 225 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 RPL4P36578 427 aaKnown RBP11.38□□□□□ -0.59
SNX1-214ENST00000625244 NPY4RP50391 375 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 MVDP53602 400 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 CLRN1P58418 232 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
SNX1-214ENST00000625244 CYP51A1Q16850 503 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 ULK3Q6PHR2 472 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 DLEU7Q6UYE1 221 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 OR4C13Q8NGP0 309 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 RCN3Q96D15 328 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
SNX1-214ENST00000625244 OR2H1Q9GZK4 316 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 MYLK2Q9H1R3 596 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 TMCC3Q9ULS5 477 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 IFT52Q9Y366 437 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 UGT2A1Q9Y4X1 527 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 FRAS1Q86XX4 4008 aa11.38□□□□□ -0.59
SNX1-214ENST00000625244 TRBV5-3A0A0A0MS03 114 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 A0A0G2JPF8 293 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HNRNPCL2B2RXH8 293 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HNRNPCL3B7ZW38 293 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 E9PQ18 207 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HNRNPCL1O60812 293 aaKnown RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 IGHG1P01857 330 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 F13BP05160 661 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HNRNPCL4P0DMR1 293 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HOXB9P17482 250 aaPredicted RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 NUDT2P50583 147 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 MNAT1P51948 309 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 MRPS34P82930 218 aaKnown RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 ZNF181Q2M3W8 571 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 DMRTC1Q5HYR2 192 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 KRT73Q86Y46 540 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 OR5AS1Q8N127 324 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 OR8J3Q8NGG0 315 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 HAVCR1Q96D42 359 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 ECSITQ9BQ95 431 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 CPPED1Q9BRF8 314 aaPredicted RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 SMURF1Q9HCE7 757 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 CAB39Q9Y376 341 aaPredicted RBP11.37□□□□□ -0.59
SNX1-214ENST00000625244 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
SNX1-214ENST00000625244 A0A1W2PRD5 423 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 A0A1W2PRF3 423 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 A0A1W2PRM7 423 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 RNF13O43567 381 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 SLC2A10O95528 541 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 ABHD16AO95870 558 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 BMP2P12643 396 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 GPX2P18283 190 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 MTPNP58546 118 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 MXRA7P84157 204 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
SNX1-214ENST00000625244 SGCAQ16586 387 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms