RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FAM216AQ8WUB2 273 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 FAHD2AQ96GK7 314 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 OR2H1Q9GZK4 316 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 PCDHB10Q9UN67 800 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 H3BN98 237 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TIPRLO75663 272 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 CLPTM1O96005 669 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 IFNGP01579 166 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 FASP25445 335 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 CRYBB2P43320 205 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 CCL8P80075 99 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TEKQ02763 1124 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 GLO1Q04760 184 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ENDOGQ14249 297 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 KCNMB1Q16558 191 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ALKBH6Q3KRA9 238 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ACSM5Q6NUN0 579 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TMEM154Q6P9G4 183 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ARL9Q6T311 187 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 C1orf229Q6ZS94 237 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TMEM179BQ7Z7N9 219 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 C1orf174Q8IYL3 243 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ATG16L2Q8NAA4 619 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 SNX33Q8WV41 574 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 DNAJC9Q8WXX5 260 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 C11orf40Q8WZ69 217 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 NIPSNAP1Q9BPW8 284 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TEX12Q9BXU0 123 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 BCL2L14Q9BZR8 327 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 ZNF665Q9H7R5 613 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 EMC7Q9NPA0 242 aa14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 RPRD1BQ9NQG5 326 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 NDRG4Q9ULP0 352 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-203ENST00000594298 TMEM89A2RUT3 159 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 SOX14O95416 240 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 COX5BP10606 129 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 CCL2P13500 99 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 EPHA1P21709 976 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 CCNOP22674 350 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 UCP2P55851 309 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 ACTG1P63261 375 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 AQP6Q13520 282 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 ATP6AP1Q15904 470 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 MOGQ16653 247 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 ZBTB46Q86UZ6 589 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 OR6V1Q8N148 313 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 NPEPL1Q8NDH3 523 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 CPEB3Q8NE35 698 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 SDR9C7Q8NEX9 313 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 OR8D4Q8NGM9 314 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 OR5K1Q8NHB7 308 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 AKR7LQ8NHP1 331 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 UTP4Q969X6 686 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 RAB39BQ96DA2 213 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 ZMYND19Q96E35 227 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 TSSK2Q96PF2 358 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 WNT5BQ9H1J7 359 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
SHKBP1-203ENST00000594298 IGLV1-36A0A0B4J1U3 117 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 IGHV1-69-2A0A0G2JMI3 117 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 C5orf49A4QMS7 147 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 OR6C68A6NDL8 312 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 RIIAD1A6NNX1 92 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 TRIM77I1YAP6 450 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 SGCEO43556 437 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 CDC14BO60729 498 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 AVPP01185 164 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 SCG5P05408 212 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 LCKP06239 509 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 OSMP13725 252 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 ERVS71-1P61550 626 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 POM121L2Q96KW2 1035 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 JMJD8Q96S16 334 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 RBM4Q9BWF3 364 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 CDADC1Q9BWV3 514 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 KIF17Q9P2E2 1029 aa14.91□□□□□ -0.02
SHKBP1-203ENST00000594298 LOC105371242A0A075B767 164 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 A0A0G2JMP0 313 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 A0A0X1KG70 313 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 J3QLI3 93 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 SPRY1O43609 319 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 PLPP2O43688 288 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 MPZL1O95297 269 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 IGHV3-13P01766 116 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 HLA-DQA2P01906 255 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 MT-ND5P03915 603 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 ZNF3P17036 446 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 PRKACGP22612 351 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 POU1F1P28069 291 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 GRK5P34947 590 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 MVKQ03426 396 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 ZNF774Q6NX45 483 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 SLC27A4Q6P1M0 643 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 C1QL2Q7Z5L3 287 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 SLC37A3Q8NCC5 494 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 PROKR2Q8NFJ6 384 aa14.9□□□□□ -0.02
SHKBP1-203ENST00000594298 GJC3Q8NFK1 279 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms