RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PPIL3Q9H2H8 161 aaKnown RBP18.23■□□□□ 0.51
PNKP-203ENST00000593946 ASF1BQ9NVP2 202 aa18.23■□□□□ 0.51
PNKP-203ENST00000593946 GATBO75879 557 aaKnown RBP18.22■□□□□ 0.51
PNKP-203ENST00000593946 CTSSP25774 331 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 HSD11B1P28845 292 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 MPGP29372 298 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 SDC2P34741 201 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 SH3BGRP55822 239 aaPredicted RBP18.22■□□□□ 0.51
PNKP-203ENST00000593946 PCBD1P61457 104 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 SCRN3Q0VDG4 424 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 KLRB1Q12918 225 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 TAF13Q15543 124 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 FAM27D1Q5T7N8 215 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 PAMR1Q6UXH9 720 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 SLC16A14Q7RTX9 510 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 OR14A2Q96R54 314 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 PLEK2Q9NYT0 353 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 OR52A1Q9UKL2 312 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 GTF2A1LQ9UNN4 478 aa18.22■□□□□ 0.51
PNKP-203ENST00000593946 TPRP12270 2363 aaKnown RBP18.22■□□□□ 0.51
PNKP-203ENST00000593946 SHISA3A0PJX4 238 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 CDRT1O95170 752 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 ITGA5P08648 1049 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 HOXD4P09016 255 aaPredicted RBP18.21■□□□□ 0.51
PNKP-203ENST00000593946 ZNF32P17041 273 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 FOXF2Q12947 444 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 RAB35Q15286 201 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 CNEP1R1Q8N9A8 125 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 FGFBP3Q8TAT2 258 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 PPP1R14AQ96A00 147 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 HDHD2Q9H0R4 259 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 ZNF224Q9NZL3 707 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 ACACBO00763 2458 aa18.21■□□□□ 0.51
PNKP-203ENST00000593946 TRBV5-5A0A0J9YX44 114 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 ZNF879B4DU55 563 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 SGCEO43556 437 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 CLPXO76031 633 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 TOXO94900 526 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 CNOT4O95628 575 aaKnown RBP18.2■□□□□ 0.5
PNKP-203ENST00000593946 IL18BPO95998 194 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 MMP7P09237 267 aaPredicted RBP18.2■□□□□ 0.5
PNKP-203ENST00000593946 UCHL1P09936 223 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 CALRP27797 417 aaKnown RBP18.2■□□□□ 0.5
PNKP-203ENST00000593946 OTX1P32242 354 aaPredicted RBP18.2■□□□□ 0.5
PNKP-203ENST00000593946 VWA1Q6PCB0 445 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 PHYHIPQ92561 330 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 KCNJ15Q99712 375 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 TIMM10BQ9Y5J6 103 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 NBEAQ8NFP9 2946 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 SYNGR3O43761 229 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 TNFSF13O75888 250 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 CRHP06850 196 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 PATE4P0C8F1 98 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 PER3P56645 1201 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 MXD1Q05195 221 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 ODF4Q2M2E3 257 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 Q499Y3 187 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 BCL2L15Q5TBC7 163 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 GFRALQ6UXV0 394 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 RDH10Q8IZV5 341 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 RPRMLQ8N4K4 120 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 OR10AC1Q8NH08 325 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 SLC25A46Q96AG3 418 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 OR2H1Q9GZK4 316 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 MOB1AQ9H8S9 216 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 SNTG1Q9NSN8 517 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 ZNF835Q9Y2P0 537 aa18.2■□□□□ 0.5
PNKP-203ENST00000593946 A0A096LPE4 126 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 A0A1W2PPZ6 126 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 DOK2O60496 412 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 ISG15P05161 165 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 TIMP3P35625 211 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 CX3CR1P49238 355 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 MTNR1BP49286 362 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 PRKXP51817 358 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 PSG4Q00888 419 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 RSPO1Q2MKA7 263 aaPredicted RBP18.19■□□□□ 0.5
PNKP-203ENST00000593946 EIF2S3LQ2VIR3 472 aaKnown RBP18.19■□□□□ 0.5
PNKP-203ENST00000593946 Q6ZT83 130 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 OR51A4Q8NGJ6 313 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 GPR148Q8TDV2 347 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 ZFP3Q96NJ6 502 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 DERL3Q96Q80 235 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 BARHL1Q9BZE3 327 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 WNT5BQ9H1J7 359 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 TP63Q9H3D4 680 aaPredicted RBP18.19■□□□□ 0.5
PNKP-203ENST00000593946 PLSCR4Q9NRQ2 329 aa18.19■□□□□ 0.5
PNKP-203ENST00000593946 NUFIP1Q9UHK0 495 aaKnown RBP18.19■□□□□ 0.5
PNKP-203ENST00000593946 OR6C6A6NF89 314 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 PRRG2O14669 202 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ARL6IP5O75915 188 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 CLEC2LP0C7M8 214 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 CRYGSP22914 178 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 SOX6P35712 828 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 MAGEB1P43366 347 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ZNF121P58317 390 aaPredicted RBP18.18■□□□□ 0.5
PNKP-203ENST00000593946 GALK2Q01415 458 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ECH1Q13011 328 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 SLC36A2Q495M3 483 aa18.18■□□□□ 0.5
PNKP-203ENST00000593946 ZNF774Q6NX45 483 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms