RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PYURFQ96I23 114 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 COQ7Q99807 217 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 FUZQ9BT04 418 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 SYT4Q9H2B2 425 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 IL19Q9UHD0 177 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 PFDN2Q9UHV9 154 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 PURGQ9UJV8 347 aaKnown RBP6.44□□□□□ -1.38
NPC1-208ENST00000590301 POLR1DQ9Y2S0 133 aa6.44□□□□□ -1.38
NPC1-208ENST00000590301 CUBNO60494 3623 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 ARFGEF3Q5TH69 2177 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 TRBV4-1A0A0J9YWV2 114 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 ISPDA4D126 451 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 SOCS2O14508 198 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 GADD45GO95257 159 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 FSTL3O95633 263 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 RENP00797 406 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 SCG5P05408 212 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 SELEP16581 610 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 EPHA1P21709 976 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 HIST1H3AP68431 136 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 COX10Q12887 443 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 SEC23BQ15437 767 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 RFX4Q33E94 735 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 HIST2H3PS2Q5TEC6 136 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 RPL13AP3Q6NVV1 102 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 FBXW12Q6X9E4 464 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 HIST2H3AQ71DI3 136 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 CPLX4Q7Z7G2 160 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 PGAM4Q8N0Y7 254 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 MUC20Q8N307 709 aaPredicted RBP6.43□□□□□ -1.38
NPC1-208ENST00000590301 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 LINC00471Q8N535 108 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 ZNF283Q8N7M2 679 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 OR2Z1Q8NG97 314 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 NANPQ8TBE9 248 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 FANK1Q8TC84 345 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 POP5Q969H6 163 aaKnown RBP6.43□□□□□ -1.38
NPC1-208ENST00000590301 APOBEC3DQ96AK3 386 aaPredicted RBP6.43□□□□□ -1.38
NPC1-208ENST00000590301 CMBLQ96DG6 245 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 NSMCE2Q96MF7 247 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 SUCNR1Q9BXA5 334 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 NUAK2Q9H093 628 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 RERGLQ9H628 205 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 TMEM106BQ9NUM4 274 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 FAM53CQ9NYF3 392 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 TMCC3Q9ULS5 477 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 PPP1R3CQ9UQK1 317 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
NPC1-208ENST00000590301 STARD10Q9Y365 291 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 IER3IP1Q9Y5U9 82 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 NPTNQ9Y639 398 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 CACNG2Q9Y698 323 aa6.43□□□□□ -1.38
NPC1-208ENST00000590301 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.42□□□□□ -1.384e-6■■□□□ 13.3
NPC1-208ENST00000590301 IGLV1-36A0A0B4J1U3 117 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 A0A1B0GWJ7 208 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 LRRC30A6NM36 301 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 TRIM77I1YAP6 450 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 RER1O15258 196 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 OR10H3O60404 316 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 DCTN3O75935 186 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 KRT36O76013 467 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 IGHV2-70P01814 119 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 SEMG1P04279 462 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 FABP3P05413 133 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 FPR2P25090 351 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 NOS3P29474 1203 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 CDKN2AP42771 156 aaKnown RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 GSSP48637 474 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 SRP9P49458 86 aaKnown RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 FXYD6P3P58550 94 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 HILS1P60008 231 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 SPIBQ01892 262 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 CCDC92Q53HC0 331 aaPredicted RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 TMEM255AQ5JRV8 349 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 C16orf89Q6UX73 402 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 PTCHD4Q6ZW05 846 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 PIGWQ7Z7B1 504 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 ZBTB46Q86UZ6 589 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 LRRC28Q86X40 367 aaPredicted RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 FAM86B1Q8N7N1 296 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 SEMA6DQ8NFY4 1073 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 SLC26A10Q8NG04 563 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 OR8G5Q8NG78 346 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 OR13G1Q8NGZ3 307 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 OR52J3Q8NH60 311 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 GATAD2BQ8WXI9 593 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 ZNF582Q96NG8 517 aaPredicted RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 ERMAPQ96PL5 475 aaPredicted RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 RBM4Q9BWF3 364 aaKnown RBP6.42□□□□□ -1.38
NPC1-208ENST00000590301 HCAR1Q9BXC0 346 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 TMPRSS13Q9BYE2 586 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 FAM107BQ9H098 131 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 OR52D1Q9H346 318 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 IL1RAPQ9NPH3 570 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 CD300AQ9UGN4 299 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 IL20RAQ9UHF4 553 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 TAGLN3Q9UI15 199 aa6.42□□□□□ -1.38
NPC1-208ENST00000590301 PCDHB10Q9UN67 800 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms