RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 MRPS18AQ9NVS2 196 aaKnown RBP13.38□□□□□ -0.27
RPRD1A-208ENST00000589050 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
RPRD1A-208ENST00000589050 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
RPRD1A-208ENST00000589050 GRIP1Q9Y3R0 1128 aa13.38□□□□□ -0.27
RPRD1A-208ENST00000589050 SPEF1Q9Y4P9 236 aa13.38□□□□□ -0.27
RPRD1A-208ENST00000589050 DAPL1A0PJW8 107 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 IRGMA1A4Y4 181 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 J3QRE1 110 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 PSMD9O00233 223 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 XPNPEP2O43895 674 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 NR4A1P22736 598 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 HSD11B1P28845 292 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 WNT5AP41221 380 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 GRB2P62993 217 aaKnown RBP13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 ACTC1P68032 377 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 ACTA1P68133 377 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 HGFACQ04756 655 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 KRTAP27-1Q3LI81 207 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 ARL9Q6T311 187 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF322Q6U7Q0 402 aaPredicted RBP13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 LRRN1Q6UXK5 716 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 KRT77Q7Z794 578 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 NEUROG1Q92886 237 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 C4orf45Q96LM5 186 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 KCNJ15Q99712 375 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 RHNO1Q9BSD3 238 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 OR51B6Q9H340 312 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 PLCXD1Q9NUJ7 323 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 SLCO1C1Q9NYB5 712 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 USP9YO00507 2555 aaPredicted RBP13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 SPTBN1Q01082 2364 aaKnown RBP13.37□□□□□ -0.27
RPRD1A-208ENST00000589050 A0A1W2PPR1 153 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 PRR32B1ATL7 298 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 M0R135 149 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 SLC1A7O00341 560 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 ABHD16AO95870 558 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 FAM157BP0CG42 384 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 PCSK6P29122 969 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 SLC6A9P48067 706 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 PRKXP51817 358 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 TPTEP56180 551 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 CSNK2BP67870 215 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 ROM1Q03395 351 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 EGR3Q06889 387 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 RSPO1Q2MKA7 263 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 ACBD7Q8N6N7 88 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 NUP37Q8NFH4 326 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 LILRB1Q8NHL6 650 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 AKAP1Q92667 903 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 GGHQ92820 318 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF799Q96GE5 643 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 OR8B4Q96RC9 309 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 MROQ9BYG7 248 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 FGF20Q9NP95 211 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 LRP12Q9Y561 859 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
RPRD1A-208ENST00000589050 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 SMPD2O60906 423 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 IGHA1P01876 353 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 RAD52P43351 418 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 CX3CR1P49238 355 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 UCP2P55851 309 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF85Q03923 595 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 DEGS2Q6QHC5 323 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 VHLLQ6RSH7 139 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 AHSA2Q719I0 299 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF679Q8IYX0 411 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF101Q8IZC7 436 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF786Q8N393 782 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF283Q8N7M2 679 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ABHD4Q8TB40 342 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 SNX33Q8WV41 574 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 UBTD1Q9HAC8 227 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 ELOVL3Q9HB03 270 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 CNOT2Q9NZN8 540 aaKnown RBP13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 PSORS1C1Q9UIG5 152 aa13.35□□□□□ -0.27
RPRD1A-208ENST00000589050 E7EQL1 145 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 HS3ST1O14792 307 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 GPRIN2O60269 458 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 ICMTO60725 284 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 ZNF254O75437 659 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 NGFP01138 241 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 APOC1P02654 83 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 KRT8P05787 483 aa13.34□□□□□ -0.27
RPRD1A-208ENST00000589050 LCKP06239 509 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms