RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CRYGBP07316 175 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 STMN1P16949 149 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 MDH1P40925 334 aaKnown RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 GRIA1P42261 906 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 RND2P52198 227 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 CMC4P56277 68 aaPredicted RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 GPX6P59796 221 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 INAQ16352 499 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 PDK4Q16654 411 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 TMPPEQ6ZT21 453 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF619Q8N2I2 560 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ZFP41Q8N8Y5 198 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 FAM83FQ8NEG4 500 aaPredicted RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 OR2Z1Q8NG97 314 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 OR10AD1Q8NGE0 317 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ACTL9Q8TC94 416 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 EMG1Q92979 244 aaKnown RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 PSKH2Q96QS6 385 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ABCG5Q9H222 651 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 CWH43Q9H720 699 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF302Q9NR11 478 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 SLC17A7Q9P2U7 560 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 SLC7A8Q9UHI5 535 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ING4Q9UNL4 249 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 NPTNQ9Y639 398 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 RP1L1Q8IWN7 2480 aaPredicted RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 FBN2P35556 2912 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF469Q96JG9 3925 aaPredicted RBP0.32□□□□□ -2.36
FOXN3-216ENST00000557496 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CLDN34H7C241 214 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CHMP2AO43633 222 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 FGGP02679 453 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 PRB4P10163 310 aaPredicted RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 NCF1P14598 390 aaPredicted RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 NCK1P16333 377 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CHMLP26374 656 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CCT3P49368 545 aaKnown RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 VSX2P58304 361 aaPredicted RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 SLC25A11Q02978 314 aaKnown RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 QPRTQ15274 297 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CHRNA6Q15825 494 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 UQCC3Q6UW78 93 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 LRRC74BQ6ZQY2 392 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 NAA40Q86UY6 237 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 PDIK1LQ8N165 341 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF645Q8N7E2 425 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 SLC26A10Q8NG04 563 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 OR1J4Q8NGS1 313 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 RHEBL1Q8TAI7 183 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CXorf40AQ8TE69 158 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 STMN2Q93045 179 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 C10orf35Q96D05 121 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 C20orf166-AS1Q96NR2 134 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 OR2V2Q96R30 315 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 COPS8Q99627 209 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 TRIM62Q9BVG3 475 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 RWDD1Q9H446 243 aaPredicted RBP0.31□□□□□ -2.36
FOXN3-216ENST00000557496 ANKRD19PQ9H560 264 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 COQ10BQ9H8M1 238 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 CTNNA3Q9UI47 895 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 PIGLQ9Y2B2 252 aa0.31□□□□□ -2.36
FOXN3-216ENST00000557496 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 GOLGA8SH3BPF8 625 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 K7EMT4 169 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 NVLO15381 856 aaKnown RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 EIF4E2O60573 245 aaKnown RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 UGT2B4P06133 528 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 ATF6P18850 670 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 HLA-DMAP28067 261 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 LUZP6Q538Z0 58 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF660Q6AZW8 331 aaPredicted RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 FAM131AQ6UXB0 335 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 ERO1BQ86YB8 467 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 PSTKQ8IV42 348 aaKnown RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 PIBF1Q8WXW3 757 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 CCDC47Q96A33 483 aaKnown RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 COQ2Q96H96 371 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 FMO2Q99518 471 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 DSN1Q9H410 356 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 ADAM28Q9UKQ2 775 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 KIF16BQ96L93 1317 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 BRD4O60885 1362 aaPredicted RBP0.3□□□□□ -2.36
FOXN3-216ENST00000557496 CNTNAP1P78357 1384 aa0.3□□□□□ -2.36
FOXN3-216ENST00000557496 A0A1W2PPV9 198 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 RDH16O75452 317 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 CTSGP08311 255 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 IQCF3P0C7M6 154 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 P0DMU3 169 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 FAM231AP0DMU4 169 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 FAM231CP0DMU5 169 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 ERGP11308 486 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 RPA2P15927 270 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 CTRB1P17538 263 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 MAPK3P27361 379 aaPredicted RBP0.29□□□□□ -2.36
FOXN3-216ENST00000557496 OTX1P32242 354 aaPredicted RBP0.29□□□□□ -2.36
FOXN3-216ENST00000557496 GPX4P36969 197 aaPredicted RBP0.29□□□□□ -2.36
FOXN3-216ENST00000557496 SSR4P51571 173 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 PRB3Q04118 309 aaPredicted RBP0.29□□□□□ -2.36
FOXN3-216ENST00000557496 BTN1A1Q13410 526 aa0.29□□□□□ -2.36
FOXN3-216ENST00000557496 SLC25A35Q3KQZ1 300 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms