RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 YBX2Q9Y2T7 364 aaKnown RBP10.86□□□□□ -0.67
NEK9-210ENST00000557026 ITGB4P16144 1822 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 LOC107986453A0A1B0GWG9 222 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 C5orf49A4QMS7 147 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 SERPINE3A8MV23 424 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 ST8SIA3O43173 380 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 SRMP19623 302 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 CCR9P51686 369 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 EMX1Q04741 257 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 KCNAB1Q14722 419 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 PCK2Q16822 640 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 COMTD1Q86VU5 262 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 ZNF707Q96C28 371 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 A0A0A6YYD5 115 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 A0A1W2PQD3 144 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 F8W036 122 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 SOX15O60248 233 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 PRTGQ2VWP7 1150 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 TMEM81Q6P7N7 255 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 PAQR6Q6TCH4 344 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 FCRL1Q96LA6 429 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 TGOLN2O43493 480 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 HRASP01112 189 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 PPP3CBP16298 524 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 PIGFQ07326 219 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 SMRP1Q8NCR6 262 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 TSLPQ969D9 159 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 REEP6Q96HR9 211 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 OR5B21A6NL26 309 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 EDIL3O43854 480 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 SPI1P17947 270 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 SOX18P35713 384 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 MRPL19P49406 292 aaKnown RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 GFERP55789 205 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 NKX6-1P78426 367 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 PMPCAQ10713 525 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 MICBQ29980 383 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 HEPHL1Q6MZM0 1159 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 LIMS2Q7Z4I7 341 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 DPCDQ9BVM2 203 aaPredicted RBP10.85□□□□□ -0.67
NEK9-210ENST00000557026 AMBRA1Q9C0C7 1298 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 ARV1Q9H2C2 271 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 LHX9Q9NQ69 397 aa10.85□□□□□ -0.67
NEK9-210ENST00000557026 MEIKINA0A087WXM9 373 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 CHRNB1P11230 501 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 OR10A3P58181 314 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ADPRMQ3LIE5 342 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 NHSL2Q5HYW2 709 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 KDM4DQ6B0I6 523 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 APOOLQ6UXV4 268 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 OR2W3Q7Z3T1 314 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ANKRD37Q7Z713 158 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 OR1F12Q8NHA8 337 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 C10orf35Q96D05 121 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 OR2A5Q96R48 311 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 SLC17A5Q9NRA2 495 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 SMCO4Q9NRQ5 59 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 MRPL15Q9P015 296 aaKnown RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 IGHV3-20A0A0C4DH32 117 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 hADV38S2A0JD32 116 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ARPC5O15511 151 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 PHF1O43189 567 aaPredicted RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 FABP6P51161 128 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 BTG1P62324 171 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 GLYATL3Q5SZD4 288 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 GNB4Q9HAV0 340 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 RBMX2Q9Y388 322 aaKnown RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 B3GALNT1O75752 331 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 NUDT7P0C024 238 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 RPL18Q07020 188 aaKnown RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 LSAMPQ13449 338 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 HABP2Q14520 560 aaPredicted RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ATP5SQ99766 215 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 GON7Q9BXV9 100 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ANKRD10Q9NXR5 420 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 TRAPPC4Q9Y296 219 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 MPC1Q9Y5U8 109 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 A0A0U1RQS6 177 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ALG1L2C9J202 215 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 HOXB5P09067 269 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 RPS16P62249 146 aaKnown RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 CYHR1Q6ZMK1 362 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ZNF546Q86UE3 836 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 OR1J1Q8NGS3 322 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 FGF11Q92914 225 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 PIGTQ969N2 578 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 LIN37Q96GY3 246 aaPredicted RBP10.84□□□□□ -0.67
NEK9-210ENST00000557026 MED30Q96HR3 178 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 DOCK2Q92608 1830 aa10.84□□□□□ -0.67
NEK9-210ENST00000557026 GOLGA4Q13439 2230 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 SLC2A1P11166 492 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms