RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SP140LQ9H930 580 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 MSL2Q9HCI7 577 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 TMEM100Q9NV29 134 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 MIOXQ9UGB7 285 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 B9D1Q9UPM9 204 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 STARD10Q9Y365 291 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 NAV3Q8IVL0 2385 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
FOXN3-205ENST00000553904 CSPG4Q6UVK1 2322 aa5.53□□□□□ -1.52
FOXN3-205ENST00000553904 ZNF469Q96JG9 3925 aaPredicted RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ALPK2Q86TB3 2170 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 TRBV4-1A0A0J9YWV2 114 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ZSCAN5BA6NJL1 495 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 WNT9BO14905 357 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 RER1O15258 196 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 DIRAS1O95057 198 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 FSTL3O95633 263 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 HOXB6P17509 224 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 EPHA1P21709 976 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 MDH2P40926 338 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 HMGA2P52926 109 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 TPTEP56180 551 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 HIST1H3AP68431 136 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 MZT1Q08AG7 82 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 COX10Q12887 443 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 GK3PQ14409 553 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 KCNJ8Q15842 424 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 CCDC92Q53HC0 331 aaPredicted RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ESCO2Q56NI9 601 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 HIST2H3PS2Q5TEC6 136 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 LEG1Q6P5S2 330 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 BTNL3Q6UXE8 466 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 FBXW12Q6X9E4 464 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 THSD4Q6ZMP0 1018 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 RFPL4BQ6ZWI9 263 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 HIST2H3AQ71DI3 136 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ZDHHC21Q8IVQ6 265 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 DEFB107AQ8IZN7 70 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 BPIFB2Q8N4F0 458 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ZNF283Q8N7M2 679 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 CELF2-AS1Q8N7Q2 184 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 SPERTQ8NA61 448 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 OR2T4Q8NH00 348 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 OR4K13Q8NH42 304 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 FANK1Q8TC84 345 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 GCDHQ92947 438 aaPredicted RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 NSL1Q96IY1 281 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 NMNAT3Q96T66 252 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 RBM4Q9BWF3 364 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 TRIM15Q9C019 465 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 MUC13Q9H3R2 512 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 PATZ1Q9HBE1 687 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 RPRD1BQ9NQG5 326 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 G6PC2Q9NQR9 355 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 DDX28Q9NUL7 540 aaKnown RBP5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ACTR3BQ9P1U1 418 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 CD300AQ9UGN4 299 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 IL20RAQ9UHF4 553 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 BAIAP2Q9UQB8 552 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 CR1P17927 2039 aa5.52□□□□□ -1.53
FOXN3-205ENST00000553904 ABCA1O95477 2261 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 IQCF6A8MYZ5 107 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 F5H5K5 113 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 TMEM178BH3BS89 294 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 TNFRSF11BO00300 401 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 DEAF1O75398 565 aaPredicted RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 PPP1R3DO95685 299 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 IFNGP01579 166 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 APOC1P02654 83 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 LCATP04180 440 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 SCG5P05408 212 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 HIST1H1CP16403 213 aaKnown RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 ZNF26P17031 533 aaPredicted RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 ADRA2CP18825 462 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 FUT4P22083 530 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 GGT2P36268 569 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 SLC15A1P46059 708 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 SLC6A9P48067 706 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 GSSP48637 474 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 BTG1P62324 171 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 GNGT1P63211 74 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 SEC23BQ15437 767 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 TAF13Q15543 124 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 SNCBQ16143 134 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 ZNF181Q2M3W8 571 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 FAM98BQ52LJ0 330 aaKnown RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 OR2T2Q6IF00 324 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 LRRN1Q6UXK5 716 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 PTCHD4Q6ZW05 846 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 PGAP1Q75T13 922 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 MRPL21Q7Z2W9 205 aaKnown RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 C1QL2Q7Z5L3 287 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 TSEN54Q7Z6J9 526 aaKnown RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 PIGWQ7Z7B1 504 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.51□□□□□ -1.53
FOXN3-205ENST00000553904 OR6V1Q8N148 313 aa5.51□□□□□ -1.53
FOXN3-205ENST00000553904 FAM86B1Q8N7N1 296 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms